Chania multitudinisentens: Z042_15245
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Entry
Z042_15245 CDS
T02987
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sfo
Chania multitudinisentens
Pathway
sfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Z042_15245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfo03019
]
Z042_15245
03016 Transfer RNA biogenesis [BR:
sfo03016
]
Z042_15245
Enzymes [BR:
sfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Z042_15245
Messenger RNA biogenesis [BR:
sfo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Z042_15245
Transfer RNA biogenesis [BR:
sfo03016
]
Prokaryotic type
tRNA degradation factors
Z042_15245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
S1_RRP5
aRib
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_SLS1_2
DUF6226
Motif
Other DBs
NCBI-ProteinID:
AHG20811
UniProt:
W0LAQ1
LinkDB
All DBs
Position
complement(222654..224774)
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AA seq
706 aa
AA seq
DB search
MLTPIIRKFQYGQHTVTIETGMIARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTTDELKASRLDLVVA
GTAGAVLMVESEADVLSEDQMLGAVVFGHDQQQVVIENINALVTEAGKPKWDWQPAPVNE
ALHARVAELAENRLGDAYHITEKQERYAQVDAIKDSVVEALLAQDDTLDASEIQDILGSV
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQSIDELMGEKTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKPED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEQDNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIHTIRINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRVYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQDVPVKVLEVDRQGRVRLSIKEATAPEAAAVAAPEAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacaccgatcattcgcaaattccagtatggccagcataccgtcactattgaaacc
ggtatgatagcgcgccaagccactgctgccgttatggtaagcatggatgacacggccgta
ttcgtgactgttgtaggccagaaaaaagccaagcctggccagagtttcttcccgctgacc
gttaactatcaggagcgtacttacgctgctggccgtattccaggcagtttcttccgccgt
gaaggccgtccgagtgaaggtgaaaccctgacttctcgtctgattgaccgcccgatccgc
cccctgttcccagatagtttcctgaacgaagtgcaggttattgctacagtggtttccgtt
aacccacaggttaacccagatatcgttgcaatgatcggtgcttctgctgctttgagcctg
tccggtattccgttcaatggccctatcggagcggcacgtgttggctatatcaacgatcaa
tatgttctgaacccaactaccgatgagctgaaagcaagccgtttggatctggtggttgcc
ggtactgcgggcgctgtgctgatggtggaatccgaagcggacgttctgagcgaagatcag
atgctgggtgcagttgtgtttggtcatgatcaacagcaagtggtgattgaaaatatcaac
gctctggttactgaagcgggtaagccgaagtgggactggcagccagctccggtcaacgaa
gcgctgcatgcgcgcgtggctgaattggccgaaaaccgcctgggcgatgcttaccacatc
actgaaaagcaagagcgttatgctcaggttgacgccattaaagacagcgtagtggaagct
ctgctggcgcaggacgatacgctggatgcatccgagattcaggatatcttgggcagcgtt
gagaaaaacgttgtacgtagccgcgtactgcgtggcgaaccacgcattgatggccgtgaa
aaagatatgatccgtggtctggacgtgcgcactggcgttctgcctcgtacccatggttca
gccttgttcacccgcggtgaaactcaggcactggtgacagcgacgctgggtactgcccgt
gatgcacagagcattgatgaactgatgggcgagaagaccgatagcttcctgttccactac
aatttccctccgtattccgttggtgagaccggcatggttggctcacctaagcgtcgtgaa
atcggccatggtcgcctggcgaagcgtggtgtgctggcagtgatgcctaaaccagaagat
ttcccgtataccgtgcgtgtggtatctgaaattactgaatccaacggttcttcttccatg
gcgtctgtttgtggcgcttctctggcgctcatggatgccggtgtgccaatcaaggctgcg
gttgcgggcatcgcaatgggcctggtgaaggagcaagacaactttgtggttctgtccgat
attctgggtgatgaagatcatctgggtgacatggacttcaaagtggctggtagccgtgaa
ggtatcactgcgctgcaaatggatatcaaaatcgaaggtattacccgcgaaataatgcag
gtggctttgaaccaggccaaaggtgctcgtttacacattctgggcgtgatggaacaggca
atcagcacaccacgtggcgatatctctgagtttgcaccgcgtattcacaccattcgcatc
aatccagacaagatcaaggatgtgattggtaaaggcggctctgtcatccgtgcgttgacc
gaagaaaccggtaccaccatcgaaattgaagatgatggtacagtgaaaattgccgctacc
gacggtgagaaagcgaaatatgctattcgtcgcatcgaagaaattaccgctgagatcgaa
gttggccgcgtgtaccagggtaaagtcacccgtatcgttgatttcggtgcctttgtggca
atcggcggcggtaaagagggcttggtacacatctctcaaatcgctgacaagcgggttgag
aaagtgaccgactatctgcaaatgggccaagatgtaccggttaaggtactggaagttgat
cgccaggggcgtgtgcgcctgagcatcaaagaagcgacagcgccggaagcggctgctgtg
gcggctccagaagcagagtaa
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