Chania multitudinisentens: Z042_15255
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Entry
Z042_15255 CDS
T02987
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sfo
Chania multitudinisentens
Pathway
sfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Z042_15255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfo03019
]
Z042_15255
03009 Ribosome biogenesis [BR:
sfo03009
]
Z042_15255
Enzymes [BR:
sfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Z042_15255
Messenger RNA biogenesis [BR:
sfo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Z042_15255
Ribosome biogenesis [BR:
sfo03009
]
Prokaryotic type
rRNA helicases
Z042_15255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
UTP25_NTPase-like
ThylakoidFormat
Cas3-like_C_2
DRTGG
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHG20813
UniProt:
W0LAF1
LinkDB
All DBs
Position
complement(219545..221452)
Genome browser
AA seq
635 aa
AA seq
DB search
MTTEFETSFADLGLSAPIISALTDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA
FSLPLLHNLDAALKAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQL
RALRQGPQIVVGTPGRLLDHLKRGTLNLSSLKGLVLDEADEMLRMGFIEDVETIMAEIPA
EHQTALFSATMPEAIRRITRRFMKEPQEVRIQSNVTTRPDISQSYWTVHGMRKNEALVRF
LESEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
IERTMKLTIPEVELPNAELLGERRLAKFAAKVQQQLESSDLDMYRALLAKLQPAEELDME
TLAAALLKMAQGERPLILPPDPVFKPRQRREFNDRDDRGSDRRRDPRSDSRDGGDRPRRE
RRDVGEMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPG
EILNHFTRTRILNKPMNMQLLGDAQPHERGERRGGARPFNGERREGAPRRSFGERREGGN
AGGERRGGNFNRDGKPAPRRDGAAPAAPRRRFGDA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgactactgagtttgaaacctcttttgctgatttggggctgtctgctccgattatttct
gccctgaccgatttgggctacgaaaaaccttctccgatccaggctgagtgtattcctcac
ctgctgaatggccgcgacgtgctgggcatggcgcagactggtagtggtaaaacggcggcg
ttctcgctgccattgctgcacaaccttgatgcagccttaaaagcaccacaaattctggtg
ttggcaccgacccgcgaactggcggttcaggttgctgaagcaatgaccgatttctccaag
catatgcatggcgtgaacgtcgtagccctatacggtggccagcgttatgacgtgcaattg
cgtgctctgcgtcaaggcccgcaaatcgtggtaggtactccaggccgtctgctggatcac
ctgaagcgcggtactttgaatctctccagcctgaagggcctggtgttggatgaagccgac
gaaatgttgcgtatgggctttattgaagatgtagaaaccatcatggcggagatcccggct
gagcatcagaccgcactgttctctgccaccatgccggaagcgattcgtcggattacccgt
cgctttatgaaagagccgcaggaagtccgcattcagtccaacgttacaacgcgtccagat
atcagccagagctactggaccgtacacggcatgcgtaaaaacgaagcgctggtgcgtttc
ttggaatcagaagattttgacgctgcgatcatcttcgtgcgtactaaaaacgcgactctt
gaagtggccgaagcgctggagcgtagcggttacaacagtgctgcactgaatggcgacatg
aaccaggccctgcgtgagcagacgctggagcgtttgaaggatggccgcctggatatcctg
attgccactgacgttgctgcccgtggtctggacgttgagcgtatcagtttggtcgtaaac
tatgatatccctatggattcagagtcttacgttcaccgtatcggccgtaccggtcgtgct
ggtcgcgctggccgtgcgctgctgtttgtagaaaatcgtgagcgccgcctgctgcgcaat
atcgaacgtaccatgaagctgaccattccagaggtagagctgccgaatgcagagctgctg
ggtgaacgccgcttagccaagttcgctgccaaagttcagcaacaactggaaagtagcgat
ctggatatgtaccgcgctttgctggctaaactgcaaccggccgaagagctggatatggaa
accttggccgcagcactgctgaaaatggctcagggtgaacgtccgctgatcctgccacca
gacccggtattcaagccacgccaacgccgtgagttcaacgatcgtgatgatcgcgggagc
gatcgtcgtcgtgatccgcgttcagatagccgtgacggtggtgatcgtccgcgtcgtgaa
cgccgtgacgttggtgagatgcagttgtaccgcattgaagtgggccgtgatgatggtgtg
gaagttcgtcatatcgttggcgctatcgctaacgagggtgatatcagcagccgttatatc
ggtaacatcaaactgttcgcttcccactcaactatcgagctgccaaaaggtatgccgggc
gagatcctgaatcactttactcgcacgcgtattctgaataagccgatgaatatgcagttg
ctgggtgatgcgcagccgcatgaacgtggtgagcgccgtggtggtgctcgtccattcaac
ggcgaacgtcgtgaaggtgcgccacgtcgttctttcggtgagcgtcgtgaaggtggtaat
gcgggtggtgagcgccgtggtggtaatttcaaccgtgatggcaaaccagccccacgccgt
gatggtgctgcacctgctgcgccacgccgccgcttcggtgatgcataa
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