Chania multitudinisentens: Z042_20230
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Entry
Z042_20230 CDS
T02987
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sfo
Chania multitudinisentens
Pathway
sfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Z042_20230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfo03019
]
Z042_20230
Enzymes [BR:
sfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Z042_20230
Messenger RNA biogenesis [BR:
sfo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Z042_20230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
AAA_22
Shikimate_DH
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AHG21676
UniProt:
W0LD64
LinkDB
All DBs
Position
complement(4616269..4617609)
Genome browser
AA seq
446 aa
AA seq
DB search
MSFETLGLSADILRAVEEQGYREPTPIQRQAIPVVLAGRDLMASAQTGTGKTAGFTLPLL
QLLSKHDHPVKGRRPVRALILTPTRELAAQIGENVEAYSKHLRLRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKALAGKLLHNPASVEVARRNTASEQVEQSVHFVDKKRKRELLSQMI
GEGDWKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAECTGEAISLVCVDEHKLLRDI
ERLLKREIPRIALPGYEPDPSIKAEPIINGRQGGGRGAPRGNGGGQRSGNGGGQRENRGN
SARPQGDGKPRSGAPARRPRNRKPAE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgaaaccctcggcttaagtgccgatattctgcgcgctgttgaagagcagggc
tatcgtgaacctacgccaattcaacgccaggcaattcctgttgtcttggcaggccgtgac
ctgatggccagcgctcagaccggtactggtaaaacggcgggttttaccctgccgctgttg
caattgctgagtaagcacgatcatccggttaaaggccgccgtccggtacgggcgttgatc
ctgacgccaacccgcgaactggccgcccagatcggcgaaaacgtcgaagcctacagtaaa
cacctgcggttgcgttcgctggtggtgttcggtggtgtgagcatcaacccgcaaatgatg
aagctgcgtggtggcgtcgatattctggtggcaacgccgggtcgcttgctggatttggaa
catcagaacgcggttgatctatccaaaattgaaattctggtgctggatgaagcggatcgc
atgctggacatgggctttatccatgatatccgccgggtgttggccaagttgcccgccaag
cgccagaacctgctgttctctgccaccttctccgacgatatcaaagcgctggcgggcaaa
ttgctgcataacccggcctcggtggaagtcgcgcgccgtaatacggcttctgagcaagtg
gaacagagcgttcattttgtggataagaagcggaaacgggaactgctttcccaaatgatt
ggcgaaggtgactggaagcaggtgctggtatttaatcgtaccaagcatggtgcaaaccat
ctggccgagcaattgaataaagatggtatcaccgcagcggccattcatggcaacaagagc
caaggggcgcgtacccgtgcgctggccgactttaaagacggcaaaatccgggtgctggtg
gcgaccgatatcgccgcgcgtggtctggatatcgatcagttgccgcatgtggtgaactat
gagctgccaaacgtgccggaagactatgtacaccgcattggccggactggccgtgctgaa
tgcacgggggaagcgatttcgctggtgtgtgtggatgagcacaagctgctgcgcgatatt
gagcgcctgctaaagcgtgaaattccgcgtattgccctgccgggatatgagccagatccg
tcaattaaagcggaaccgatcatcaatggccgccaggggggtggccgtggtgcaccgcgg
ggtaacggcggtgggcagcgcagcggcaacggtggcggccagcgtgaaaaccgcggcaac
agcgctcgcccgcaaggggatggcaagccgcgttccggggcacctgcgcgccgcccgcgt
aaccgtaaaccggcagaataa
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