Stenotrophomonas forensis: K5L94_00140
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Entry
K5L94_00140 CDS
T10605
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
sfoe Stenotrophomonas forensis
Brite
KEGG Orthology (KO) [BR:
sfoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfoe03000
]
K5L94_00140
Transcription factors [BR:
sfoe03000
]
Prokaryotic type
Helix-turn-helix
LacI family
K5L94_00140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Peripla_BP_6
HTH_23
MarR_2
HTH_Tnp_ISL3
HHH_5
HTH_3
DUF3853
HTH_36
HHH
HTH_7
HTH_17
HTH_24
HTH_29
HTH_IclR
HTH_Crp_2
Ribosomal_L34
HTH_28
HTH_10
Motif
Other DBs
NCBI-ProteinID:
WDM63742
LinkDB
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Position
30399..31454
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AA seq
351 aa
AA seq
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MSVRIISDAALPASKGKAATINDIARLSGVSKKTVSRIINNSPLVRKDTRDKVEALMREV
GYVPDPLARGLAFRRSFLIGLVYDDPGAQCIVDLQHGALEALRGTGYELVVHPCDSEDPE
CAQGVRRFVQQQKLHGVILGPRASESAALAQVLDEIDCRYVRINAHVSDDEAQAVVTHDR
DGAAAAAGYLLSLGHRDIAVIAGPGDRRAARERTHGFLDRLAQVGLTLPGERVLEAGDTF
ESGVHAAERLLMGEGRPSAIFAGNDEMAAGVYQVALRAGIAVPQQLSIVSYDDSPLASRL
WPPLTSVRRHVSDIGRMAAAMLVQTGVPEAPTAASVHPQLMVRGSCRAVDA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgcgaattattagcgatgccgcgttgccggcatcgaagggcaaggctgccacg
atcaacgacatcgcacgactgtcgggagtttccaagaaaacggtttcaagaatcatcaac
aactcgccgctggtgcgcaaggacacccgcgacaaggtcgaggcgttgatgcgcgaggtc
ggttacgtgcccgaccccctggcacgcggactcgcgttccgccgctccttcctgatcggc
ctggtgtatgacgacccgggcgcccaatgcatcgtcgacctgcagcacggcgcgctggaa
gcgctgcgcggcaccggctacgagctggtggtgcatccgtgcgacagcgaggatccagag
tgcgcacagggcgtgcgtcgcttcgtgcagcagcagaagctgcatggcgtgatccttggc
ccacgcgcgtccgagtcggctgcattggcgcaggtgctggacgagatcgactgccgctac
gtccgcatcaacgcgcatgtgtccgatgatgaggcgcaggccgtggtcacccatgatcgc
gatggcgctgccgccgcagcgggttacctgctttcgctcggccaccgcgacatcgcggtg
atcgccggcccaggtgaccgccgcgctgcacgcgaacgtacccatggcttcctcgatcgg
ctcgcccaggtaggcctgaccctgcccggtgagcgtgtgctggaagcgggcgacaccttc
gaatccggcgtgcatgccgccgaacgactgctgatgggcgaaggcaggcccagtgcgatc
ttcgccggcaacgacgagatggccgctggcgtttaccaggtggccctgcgtgcgggcatc
gcggtgccgcagcagctgtcgatcgtcagctacgacgacagcccgctggcatcgcggttg
tggccaccgctgacctcggtgcgccgccacgtctccgatatcggccgcatggccgcggcg
atgctggtgcagaccggcgtaccggaggcgccgaccgcggccagcgtgcatccgcagctg
atggtgcgtggttcctgccgggccgtggacgcctga
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