Stenotrophomonas forensis: K5L94_00320
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Entry
K5L94_00320 CDS
T10605
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfoe Stenotrophomonas forensis
Brite
KEGG Orthology (KO) [BR:
sfoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfoe03032
]
K5L94_00320
03400 DNA repair and recombination proteins [BR:
sfoe03400
]
K5L94_00320
Enzymes [BR:
sfoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K5L94_00320
DNA replication proteins [BR:
sfoe03032
]
Prokaryotic type
DNA Topoisomerases
K5L94_00320
DNA repair and recombination proteins [BR:
sfoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K5L94_00320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WDM63778
LinkDB
All DBs
Position
74023..75075
Genome browser
AA seq
350 aa
AA seq
DB search
MPTPSTPERQAARAAGLRYVDDTQPGISRRRAGTGFSYRDADGHAVRDAATLHRIRALAI
PPAYTAVWICAHANGHLQATGRDARGRKQYRYHADWAKERDAGKFDRIIAFGEALPSLRR
RLSRDLKRPGFPREKVLAMVVALLADTLVRVGNETYAQQNRSFGLTTLRNRHLELLRGGR
VRMRFRGKSGQLQEVTVGDRRLGLLVRRLQQLPGQALFQYRDDDGALQPVDSGAVNDYLR
EVMGEDFTAKDFRTWGGTVAAVQTFAATELPEPASQRALAQAQRAVVCEVAALLGNTPAV
CRKAYIDPCVFAGWERGELAKLAGLRGPRQWEQATLKVLRRARRLANRSA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgccctccacacccgagcgccaggcggcacgtgctgccggcctgcgctatgtc
gatgacacccagcccggcatcagccgccgccgcgccggcacgggattcagctaccgcgac
gccgacggccatgcagtgcgcgatgccgccaccctgcaccgcatccgcgcgctggccatc
ccgccggcctacaccgccgtgtggatctgcgcgcacgccaacggccaccttcaggctacc
ggtcgcgatgcgcgtgggcgcaagcagtaccgataccacgccgattgggcgaaggagcgt
gacgccggcaagttcgaccgcatcatcgcctttggcgaggccttgccctcgctgaggcgg
cggttgtcgcgcgatctcaagcggccgggtttccccagggaaaaggtgctggcgatggtg
gtggcgctgctggccgacaccctggtgcgggtcggcaatgaaacctacgcacaacagaac
cgctcgttcggactgaccacactacgcaaccgccatctggagctgctgcgtggcgggcgg
gtgcgcatgcgcttccgcggcaagtccgggcagctgcaggaggtgaccgtgggcgaccgc
aggctgggcctgttggtgcggcgcctgcagcagctgccggggcaggcgctgttccagtac
cgcgatgacgacggtgcgctgcagccggtggattccggcgcagtgaacgactacctgcgc
gaggtgatgggcgaggacttcaccgccaaggatttccgcacctggggcggcaccgtggcg
gcggtgcagaccttcgccgccaccgagctgccggaaccggccagccagcgcgcgctggcc
caggcacaacgggcggtggtgtgcgaggtggcggcgttgctgggcaacacgccggcggtg
tgccgcaaggcctatatcgacccgtgcgtgttcgccggctgggaacgcggcgaactggcc
aagctggccggcctgcgcggcccgcgccagtgggagcaggcaacgctgaaggtgctgcgc
cgggcgcggcggttggccaaccgcagcgcctga
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