Stenotrophomonas forensis: K5L94_05055 Help Entry K5L94_05055       CDS       T10605                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism sfoe  Stenotrophomonas forensis Pathway sfoe02020   Two-component system sfoe02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:sfoe00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     K5L94_05055  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     K5L94_05055  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sfoe03021]     K5L94_05055 Transcription machinery [BR:sfoe03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      K5L94_05055 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_23 Sigma70_r4 Sigma70_r4_2 HTH_38 MarR_2 HTH_Crp_2 HTH_AsnC-type HTH_24 HTH_11 MarR PF0610-like_N HTH_17 HTH_29 HTH_Tnp_ISL3 HTH_28 HTH_5 HTH_36 TetR_N Motif Other DBs NCBI-ProteinID:  WDM64659 UniProt:  A0ABY7Y3W1 LinkDB All DBs Position complement(1073985..1075406) Genome browser AA seq 473 aa AA seqDB search MKTRLQTSLGQQLVLTPQLQQAIKLLQMSTTELELEIAQAVESNPLLDWADSNDGPAANE ASDGNDSEAPSERADDGDDWAPAELDWSVAGSGGSFDDDDDTGSAAERVAETETLADHLL WQLHLSHLSARDRSIGATLIDALDEDGYLRESLATIAETLLPATHADEDEILAVLHRIQR FDPVGVAARSLGECLQLQLDVLPADTPGLALARQIAAGPLERLPRSGVAGLAHELKQAPA DVETAVNLLRSLDPRPGTQIAPLSQDTYVVPDVVVWRQNGVWRAALAGHAGPKVVIHRGY EQLIRRCGEADAGYLRAQLQEARWLLKGLQQRGETLLRVVRSLILQQAGFLEFGEQALRP LTLREIATELGLHESTVSRAIARKHVRTPRGTLPLRAFFASGIDTEGGGEASSTAIQAMI RRLIDDENPRKPLSDAKLADLLKSSGIPVARRTVAKYREAMNISASHERVRIA NT seq 1422 nt NT seq  +upstreamnt  +downstreamnt atgaagactcggctgcagacatcgttgggacagcagctggtgctcacgccccagctgcag caggcgatcaagctgctgcagatgtccaccaccgagctggagctggaaatcgcccaggcc gtggaaagcaatccgctgctggactgggccgacagcaacgacggccctgccgccaacgag gccagtgacggcaacgacagcgaagcccccagcgaacgcgccgacgatggcgacgactgg gcgcctgccgaactggactggagcgtcgccggcagcggtggcagcttcgacgatgacgac gacaccggcagcgccgccgagcgcgtggccgaaaccgaaacgctggccgatcacctgctg tggcagctgcacctgtcgcatctttcggcgcgcgaccgcagcatcggcgccacgctgatc gatgcgctcgacgaagacggctacctgcgcgagtcgctggccaccatcgctgagaccctg ctgccggcgacccatgccgacgaggatgagatcctcgcggtgctgcatcgcatccagcgt ttcgatccggtcggcgtggccgcgcgctcgctcggtgaatgcctgcagctgcaactggac gtgttgcccgccgacacgccagggctggcgttggcgcgacagattgccgcaggcccactg gaacggttgcctcgcagcggcgttgccgggctcgcccatgaactgaagcaagcgccggcc gacgtcgagaccgcagtcaacctgctacgttcgctggatccgcgtccaggcacgcagatt gcgccgctttcgcaggacacctacgtggtgcccgacgtggtggtgtggcggcagaacggc gtctggcgtgcggcgctggccggccacgccgggccgaaggtggtgatccaccgcggctac gaacagctcatccgccgctgtggcgaggccgatgccggctatctgcgcgcgcagctgcag gaagcacgctggctgttgaaggggctgcagcagcgcggcgaaaccctgctgcgggtggtg cgcagcctgatcctgcagcaggccggattcctcgaattcggcgaacaggcgctgcgcccg ctgacactgcgcgagatcgccaccgaactcggcctgcacgaatccacggtatcgcgcgcg atcgcgcgcaagcatgtgcgcacgccgcgcggcaccctgccgctacgcgccttcttcgcg tcgggcatcgataccgagggcggcggcgaggcgtccagcacggccatccaggccatgatc cggcgactcatcgacgacgagaacccgcgcaagccgctttctgacgccaagctggctgac ctgctcaaatcgtcgggaattccagtagcgcgacgcaccgtggcgaagtatcgtgaagcc atgaacatttccgcctcgcacgaaagggtcagaatcgcttga

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