Stenotrophomonas forensis: K5L94_06985
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Entry
K5L94_06985 CDS
T10605
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sfoe Stenotrophomonas forensis
Pathway
sfoe03030
DNA replication
sfoe03430
Mismatch repair
sfoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K5L94_06985 (dnaE)
03430 Mismatch repair
K5L94_06985 (dnaE)
03440 Homologous recombination
K5L94_06985 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfoe03032
]
K5L94_06985 (dnaE)
03400 DNA repair and recombination proteins [BR:
sfoe03400
]
K5L94_06985 (dnaE)
Enzymes [BR:
sfoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K5L94_06985 (dnaE)
DNA replication proteins [BR:
sfoe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K5L94_06985 (dnaE)
DNA repair and recombination proteins [BR:
sfoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K5L94_06985 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WDM65024
UniProt:
A0ABY7Y4Y7
LinkDB
All DBs
Position
complement(1486093..1489683)
Genome browser
AA seq
1196 aa
AA seq
DB search
MSNSRFVHLHVHTEFSLADSTIRVPAKPDQADPKKAKQANLLSRSVELGLPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADVLIAEEGQDPWRMTLLCRDREGYLSLSRLLTRAWMEG
HRPEGGVAVHPDWLKAGNANLFALAGRQSLAGRLALDGKHELAEQQLADWQRVFGDGLHL
ELTRTGREGEETFNQFALMAAGQRGLPVVASNDVRFLSPSDFSAHEARVCISTGRVLDDP
KRPREYSDQQYLKSAEEMCALFADIPDAIDNTLALAERCNIEMRLGTYFLPNYPVPDDET
LDTWIQKMSRDGLEERLEKNPLAPGKTREEYFERLEFELNTIIKMGFPGYFLIVADFIQW
GKNQGIPIGPGRGSGAGSLVAWALKITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRERVSQIITYGTMAAKAVVRDSGRVLGFPYGLVDGVSKLIPNILGIH
LKDALGKGKEGPSSEMASAELIQRYETEDDVRDLIDLALQLEDLTRNAGKHAGGVVIGPE
PLSEFCPLYAEHDENGLGKNPVTQFDKNDVEEVGLVKFDFLGLRTLTIIDWAVKAINKRH
ERAGIPPVDIAAIPLDDTPTYKDIFANGNTGAVFQFESSGMRRLLKDARPDRFEDLIALV
SLYRPGPMDLIPSFNARKHGQEEIIYPDPRTEAILKDTYGIMVYQEQVMQMAQIVGGYSL
GGADLLRRAMGKKVPAEMAKHREIFREGAAKDGVDEAKADAIFDLMEKFAGYGFNKSHAA
AYALVSYQTAWLKRHYPAEFMAATLSSDLDNTDKVVGFLDEVRNLGLTVLPPKVNQSAFM
FEAVTPDTIQYGLGAIKGVGQGACEAVVDERLKGGQYKDLLDFCTRVGSAKLNRRTLEAM
INCGALDELGHNRASLMLQLPEVIKATDQMARERASGQNSLFGGPDPSATTIQLDLPQAD
EWPLLQRLNGERDTLGFYLSGHPFDPWRDDVRDLVGNDLGSVEKIWSANSGGGGGGEKRW
RPEVQTVLAGQVVGVRRKGESQIFIQLEDGRGRVECSAFSDAMAEFGHLMTKDRILVVKG
GLREDEFNGGFALRIRQVWDFDEVCANYATRLSLRLDLRQQRPVWERIDALLDRHRPGRT
PLRLDLLLKGPQGGVAGMLDVSGQSAVRIDSKLMEALRADPAVRTLKVRYSPPWAS
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactcccgcttcgtacatctccacgtccacaccgagttctcgctggcggactcg
accatccgtgtgccggccaagccggaccaggcggacccgaagaaagccaagcaggccaat
ctgctgtcacgctcggtcgagctcgggctgcccgcgctggccgtgaccgacctcaacaac
ctgttcgccctggtcaagttctacaaggccgctgaaggcgtgggcatcaagccgatcgcc
ggcgccgacgtgctgatcgccgaggaaggccaggacccgtggcggatgaccctgctgtgc
cgcgaccgcgagggctacctgagcctgtcgcggctgctgacccgcgcctggatggaaggt
catcgcccggaaggcggcgtggccgtgcacccggactggctgaaggccggcaacgccaac
ctgttcgcgctggccgggcggcagagcctggccgggcggctggcgctggacggcaagcat
gagctggccgaacagcagctggccgactggcagcgcgtgttcggcgatggcctgcacctg
gaactgacccgtaccggccgcgaaggcgaggaaaccttcaaccagttcgcgctgatggcc
gccggccagcgcggcctgccggtggtggccagcaacgatgtgcgcttcctgtcgccgtcg
gatttcagcgcgcacgaagcacgcgtgtgcatttccaccggccgcgtgctggacgacccc
aagcgtccgcgcgagtacagcgaccagcagtacctgaagtcggccgaggagatgtgtgcg
ctgttcgccgacatccccgatgcgatcgacaacacgctggcgctggccgagcgctgcaac
atcgagatgcggctgggcacctacttcctgcccaactacccggtgccggacgacgagacc
ctggacacctggatccagaagatgtcgcgcgatggcctggaagagcgcctggagaagaat
ccgctggcgccgggcaagacccgcgaggagtacttcgagcgcctggagttcgaactcaac
accatcatcaagatgggcttcccgggctacttcctgatcgtggccgacttcatccagtgg
ggcaagaaccagggcattccgatcggccccggccgtggttcgggtgccggttcgctggtg
gcgtgggcgctgaagatcaccgacctggacccgctgccgtacaacctgctgttcgagcgc
ttcctgaacccggaacgcgtgtcgatgcccgacttcgacatcgacttctgcatggatcgc
cgcgacgaggtgatcgactacgtcgcacgcaagtacgggcgcgagcgcgtcagccagatc
atcacctacggcaccatggccgccaaggcggtggtgcgcgactccggccgcgtgcttggc
ttcccgtacggcctggtcgacggcgtttccaagctgattccgaacatcctcggcatccac
ctgaaggatgcgctgggcaagggcaaggaaggccccagctcggaaatggcctcggccgaa
ctgatccagcgctacgagaccgaggacgatgtccgcgacctgatcgacctggcgctgcag
ctggaagacctgacccgcaacgccggcaagcacgccggtggcgtggtgatcgggccggag
ccgctgagcgagttctgcccgctgtacgccgaacatgacgagaacgggctcggcaagaat
ccggtcacccagttcgacaagaacgacgtggaagaagtgggcctggtgaagttcgacttc
ctcggcctgcgcacgctgaccatcatcgactgggcggtgaaggcgatcaacaagcgccat
gagcgcgccggcatcccgccggtggacatcgccgcgatcccgctggacgacacgcccacc
tacaaggacatcttcgccaacggcaataccggcgcggtgttccagttcgaatcctcgggc
atgcgccgcctgctgaaggacgcgcgccccgaccgtttcgaagacctgattgcgctggtg
tcgctgtaccgccccggcccgatggacctgattccttccttcaacgcgcgtaagcacggc
caggaagaaatcatctatcccgatccgcgtaccgaagcgatcctgaaggacacctacggc
atcatggtgtaccaggagcaggtgatgcagatggcgcagatcgtcggcggctactcgctg
ggcggcgccgacctgctgcgccgcgcgatgggcaagaaggtgccggcggaaatggccaag
caccgcgagatcttccgcgaaggcgcggccaaggacggcgtggacgaggccaaggccgat
gcgatcttcgacctgatggagaagttcgccggctacggtttcaacaagtcgcacgccgcc
gcctacgcgctggtcagctaccagaccgcatggctgaagcgccattacccggccgagttc
atggcggccacgctgtcctcggacctggacaacaccgacaaggtggtgggcttcctcgac
gaggtgcgcaacctcggcctgaccgtgctgccgccgaaggtgaaccagtcggccttcatg
ttcgaagcggtgacgccggacaccatccagtacggcctgggcgcgatcaagggcgttggc
cagggtgcctgcgaagccgtggtcgacgaacgcctgaagggcggccagtacaaggacctg
ctcgacttctgcacccgtgtcggctcggccaagctcaaccggcgcacgctggaagcgatg
atcaactgcggcgcgctggacgagctcggccacaaccgcgcctcgctgatgctgcagctg
ccggaggtgatcaaggccaccgaccagatggcacgcgagcgcgcgtccggccagaactcg
ctgtttggcggccccgacccgagtgcaaccacgatccagctggacctgccccaggccgat
gaatggccgttgctgcagcgcctgaacggcgagcgcgacacgctgggcttctacctcagc
ggccacccgtttgatccgtggcgcgacgatgtgcgtgacctggtcggcaacgacctgggt
tcggtggagaagatctggagcgccaacagcggcggtggcggcggtggcgagaagcgctgg
cgcccggaagtgcagacggtgctggccggccaggtggtcggcgtgcgccgcaagggcgaa
agccagatcttcatccagctcgaggacggtcgcggccgcgtcgagtgcagcgcgttctcc
gacgcgatggccgagttcggccacctgatgaccaaggaccgcatcctggtggtcaagggc
ggcctgcgcgaggacgagttcaacggcggcttcgcgctgcgcatccgccaggtctgggat
ttcgatgaagtctgcgccaactacgccacccggctgtcgctgcgcctggacctgcgccag
cagcgcccggtgtgggagcgcatcgatgccctgctcgaccgccatcgcccggggcgcacc
ccgctgcgcctggacctgctgctgaagggcccgcagggcggcgtggccggcatgcttgat
gtctccgggcagagcgcggtgcgcatcgattccaagctgatggaggcgctgcgcgccgat
cccgccgtgcgcacgctgaaggtgcgctacagcccgccgtgggccagctga
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