Stenotrophomonas forensis: K5L94_07695
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Entry
K5L94_07695 CDS
T10605
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
sfoe Stenotrophomonas forensis
Pathway
sfoe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sfoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K5L94_07695 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfoe03400
]
K5L94_07695 (uvrB)
DNA repair and recombination proteins [BR:
sfoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K5L94_07695 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K5L94_07695 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
AAA_22
AIP3
Motif
Other DBs
NCBI-ProteinID:
WDM65155
LinkDB
All DBs
Position
1650556..1652580
Genome browser
AA seq
674 aa
AA seq
DB search
MSDRFELVSPYSPAGDQPDAIAKLTSNFEAGIAKQTLLGVTGSGKTYTIANVIQNVQKPT
LIMAPNKTLAAQLYGEFKAFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLAATKTLLSRPDAIVVATVSAIYGLGAPEDYLSLRLILSKGERIDQRDLINHLTQLQ
YTRNEYELQRGTFRVRGEVIDVFPAESDSEALRLELFDGEVEKITLFDPLTGETLRNMQR
FTVYPKTHYATTRERVLAAVDTIKVELKERLEQLYAENKLVEAQRLAQRTQFDIEMMAEV
GFCNGIENYSRHLTGKNAGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMFKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEERCPRAIYVSATPGPYEYREAGDEITELVVRPTGLID
PVVEIRPVGTQVDDLMSEANERIKAGDRVLVTTLTKRMAENLTEYLTEHGIRVRYLHSDV
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNVRGKAILYADKITRSMQAAIDETDRRRAKQVEYNEEHGIVPRSVARPIVDVLEGA
RSDAAEKEAKKGKGKSRAGVAEEGADYRSLSPAQLATRLKALEQQMYQHAKDLEFEDAAR
VRDQIRQLKEASLG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccgttttgaactcgtctcgccgtactcgccggcgggcgaccagcccgatgcc
atcgcgaagctgaccagcaacttcgaagcgggcatcgccaagcagaccctgctgggcgtc
accggctcgggcaagacctacaccatcgccaacgtcatccagaacgtgcagaagccgacg
ctgatcatggcgccgaacaagacgctggcggcgcagctgtatggcgagttcaaggcgttc
ttcccgcacaacgcggtggagtacttcgtcagctactacgattactaccagccggaagcc
tatgtgccgtcgtcggacaccttcatcgagaaggacagttcgatcaacgagcacatcgag
cagatgcgcctggccgcgaccaagaccctgctgtcgcgcccagatgcgatcgtggtggcg
accgtatcggcgatctatggcctgggtgcccccgaggattacctgtcgctgcgcctgatc
ctgtccaagggcgagcgcatcgaccagcgcgacctgatcaatcacctgacccagctgcag
tacacgcgcaacgagtacgaactgcagcgcggtacgttccgcgtgcgcggcgaagtgatc
gatgtgttcccggccgagtcggacagcgaggcactgcgcctggagctgttcgatggtgag
gtcgagaaaatcacgttgttcgacccgctcaccggcgagacgctgcgcaacatgcagcgc
ttcaccgtgtacccgaagacccactacgcgaccacccgcgagcgtgtgctggcggcggtg
gacaccatcaaggtcgagttgaaggagcggctggagcagctgtacgcggagaacaagctg
gtcgaggcgcagcgcctggcccagcgcacccagttcgacatcgaaatgatggccgaggtc
ggcttctgcaacggcatcgagaactactcgcgccacctcaccggcaagaatgccggcgag
ccgccgccgaccctgttcgactacctgccgcccgacgcactattggtgatcgacgaatcg
cacgtgaccattccgcagatcggcgcgatgttcaagggcgatcgctcgcgcaaggagacc
ctggtcgaattcggcttccgactgccctctgcgctggacaatcgcccgctgcgcttcgag
gagtgggaagagcgctgcccacgtgcgatctacgtgtcggctacgcccggtccctatgag
tatcgtgaagccggtgacgagatcaccgagctggtggtgcgcccgaccggcttgatcgac
ccggtggtggaaatccgcccggtcggtacccaggtcgatgacctgatgagcgaggccaac
gagcgcatcaaggccggcgaccgcgtgctggtcaccacgctgaccaagcgcatggcggag
aacctcaccgaatacctcaccgagcatggcatccgcgtgcgctacctgcattcggacgtg
gacacggtcgagcgcgtggagatcatccgcgacctgcgcctgggcaagttcgacgtgctg
gtcggcatcaacctgctgcgcgaaggcctggacatgcccgaggtgtcgctggtggcgatc
ctggatgccgacaaggagggcttcctgcgctcgacgggttcgttgatccagaccatcggc
cgcgcggcgcgcaacgtgcgcggcaaggcgatcctctatgccgacaagatcacccgttcg
atgcaggcggcgatcgacgagaccgaccgccgccgcgccaagcaggtcgagtacaacgag
gaacacggcatcgtgccgcgctcggtggcacggccgatcgtcgacgtgctggaaggcgcc
cggtccgatgcagcggagaaagaagccaagaagggcaagggcaagagccgggcaggcgtg
gcagaggaaggggccgactaccggtcgctcagcccggcccagctggccacccggctcaag
gcgctggagcagcagatgtaccagcatgccaaggacctggagttcgaggatgcggcacgc
gtgcgcgaccagatccggcagctgaaggaagccagcctgggctga
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integrated database retrieval system
