Stenotrophomonas forensis: K5L94_10700
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Entry
K5L94_10700 CDS
T10605
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sfoe Stenotrophomonas forensis
Pathway
sfoe03410
Base excision repair
sfoe03430
Mismatch repair
sfoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K5L94_10700 (recJ)
03430 Mismatch repair
K5L94_10700 (recJ)
03440 Homologous recombination
K5L94_10700 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfoe03400
]
K5L94_10700 (recJ)
DNA repair and recombination proteins [BR:
sfoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
K5L94_10700 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K5L94_10700 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K5L94_10700 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WDM65712
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All DBs
Position
2253712..2255469
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AA seq
585 aa
AA seq
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MSLAADAVQPSTDTVTIRRRDAVAPGNWPDGTLPLLARLYASRDAGTPELALPKLGNLHA
PELLTGIDDAVGLLVEAIANDKRILVVGDFDCDGATACAVGVRGLRMLGAQHVFHAVPNR
MVHGYGLSPSLVDELAALQPDLLVTVDHGIACHAGVTAAKARGWQVLVTDHHLPGPQLPP
ADVIVDPNLDGDAFPSKSLAGVGVIFYVLMALRRQMREAGVFADGKGPDLTTLLDLVAVG
TVADLVALDPNNRALVSAGLRRLRAGQGCVGLRALIEASGRDAARLTATDIGFALGPRLN
AAGRLEDMALGIALLLTEDPRQARDIAQTLEQINSERRAVQQSMTDDAEQALTRVVLDTA
GQRPVAACLFDADWHPGVVGLVASKMKDRLHRPVIAFAPAEPGADTLRGSARSIPGLHIR
DALALVDARHPGLIERFGGHAMAAGLSLRLDHIDDFKAAFVAVVLEMLDPAALQQQVLSD
GELAAEELDHRHADALRLAGPWGQGFPEPLFDGHFEVANWRVLKERHLKLELRLPGVPGT
INAIHFGGWHGNAPGRHVHLAYRLACDDYRGGSAIQLIVEHCLPG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttgccgccgatgctgtgcagccatccactgatacggtgacgatccgccgtcgc
gatgcggtcgcacccggcaactggccggacggcacactgccgctgctggcgcggctctac
gccagtcgcgatgccggtaccccggagctggcactgccgaaactgggcaatctgcacgcg
cccgagctgctgaccggcatcgatgatgcagtgggcctgctggtcgaggccatcgccaat
gacaagcgcatcctggtggtcggcgatttcgattgtgatggcgctaccgcctgcgcggtg
ggcgtgcgcggcctgcgcatgctcggcgcgcagcatgtcttccacgcggtgccgaaccgc
atggtgcacggctatggcctgtcgccgtcgctggtggacgaactggccgcgctgcagccg
gacctgctggttacggtcgaccacggcattgcctgccatgcgggcgtgactgcggccaag
gcgcgtggctggcaggtgctggtcaccgaccatcacctgccgggcccgcagctgccgccg
gccgatgtcatcgtcgatccgaacctggatggcgatgccttccccagcaaatcgctggcc
ggtgtcggcgtgattttctacgtgctgatggcgttgcgccggcagatgcgcgaggccggt
gtcttcgccgatggcaaggggccggacctgaccacgctgctggacctggtggcggtgggc
accgtcgccgacctggtggcgctggaccctaacaatcgtgcactggtcagcgcgggcctg
cgccggctgcgtgctgggcagggctgtgtcggcctgcgcgccctgatcgaagccagtggc
cgcgatgccgcacgactgaccgccaccgatatcggcttcgcacttgggccgcgcctgaac
gctgccggccggctggaggacatggcgctgggcatcgcgctgctgctgaccgaggaccca
cggcaggcacgcgacattgcgcagacacttgagcagatcaattcggaacggcgcgcggtg
cagcagtcgatgaccgacgacgccgagcaggcgctgacccgcgtggtgctggacacggcc
ggccagcggccggtggcggcctgcctgttcgatgccgactggcacccgggcgtggtgggc
ctggtcgcgtcgaagatgaaggaccgcctgcaccgtccggtgatcgccttcgcccccgcc
gaaccgggcgccgacaccctgcgtggctcggcccgctcgattcccggcctgcacatccgt
gacgcgctggcgctggtcgacgcacgccatccgggcctgatcgaacgtttcggtgggcat
gcgatggcggccggcctcagcctgcgcctggatcacattgatgacttcaaggccgctttc
gtcgccgtggtgctggaaatgctcgacccggcggcgctgcagcagcaggtgctgagcgac
ggtgaactggcggcggaggaactcgaccatcgccacgccgatgcgctgcgcctggccggg
ccgtgggggcagggcttcccggaaccactgttcgacggccacttcgaagtggccaactgg
cgcgtgctgaaggagcgccacctgaagctcgaactgcgcctgccgggcgtgcccggcacg
atcaacgccattcacttcggcggctggcacggcaatgcgccgggccgccatgtgcatctc
gcctaccggctggcctgcgatgactaccgtggtggcagcgcgatccagctgatcgtcgag
cactgcctgcccggctga
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