Stenotrophomonas forensis: K5L94_11090
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Entry
K5L94_11090 CDS
T10605
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
sfoe Stenotrophomonas forensis
Pathway
sfoe02020
Two-component system
sfoe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sfoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K5L94_11090
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K5L94_11090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfoe03000
]
K5L94_11090
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sfoe02035
]
K5L94_11090
Transcription factors [BR:
sfoe03000
]
Prokaryotic type
Helix-turn-helix
Other families
K5L94_11090
Bacterial motility proteins [BR:
sfoe02035
]
Flagellar system
Flagellar assembly proteins
Others
K5L94_11090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
HTH_50
AAA_30
AAA_19
bpMoxR
AAA
MCM
Motif
Other DBs
NCBI-ProteinID:
WDM65783
LinkDB
All DBs
Position
complement(2351310..2352815)
Genome browser
AA seq
501 aa
AA seq
DB search
MSESRILVLDNDAVRAERTVALLEFMDFNPRWVSDAADFDLGRQRQNDWMAVIVGSLDDS
AASTALYHWLGGSSLPPPVLLADGDAAAFAQQHGLHEANIWPLETPLRHAQMEALLRRAS
LKRLDAEHQAGAVQEQGPTGNGPAVTELRTMIEQVAAFDTTVLVLGESGTGKEVVSRAIH
QRSPRRDGPFVAINCGAIPADLLESELFGHEKGAFTGALTARKGRFEMAEGGTLLLDEIG
DMSLPMQVKLLRVLQERSFERVGGNQTIRCNVRVVAATHRDLETRIAEGKFREDLFYRLN
VFPIDVPALRERREDLPALVETIAAQLARTGRGEVRFTAEALQALAGYEWPGNVRELTNL
VERLAVLHPGGSVRVQDLPARYRGDAALAAVAAPAPVQSVASEERLDLRSFSFHTPGSGN
QPALEHGIAVNRVAAPAALPDEGMDLRNHMANIELGLINEALERTQGVVAHAAQLLGLRR
TTLVEKLRKYGIEREQAELAG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaatcgcgcatccttgtactggacaacgacgccgtgcgtgccgagcgcaccgtt
gccctgctggaattcatggacttcaacccgcgctgggtctccgacgcggccgatttcgac
ctgggccgccagcgccagaacgactggatggcggtgatcgtcggcagcctggatgacagt
gccgccagcactgcgctgtaccactggctcggcggcagcagcctgccgccgccggtgctg
ctggccgacggcgatgccgctgccttcgcgcagcagcatggcctgcacgaggccaacatc
tggccgctggagaccccgctgcgccacgcgcagatggaagccctgctgcgtcgcgccagc
ctcaagcgcctggatgccgagcaccaggccggtgccgtgcaggagcagggaccgaccggc
aacggcccggccgtcaccgaactgcgcaccatgatcgagcaggtcgccgcgttcgatacc
accgtgctggtgctgggcgaatcgggtaccggcaaggaagtggtgtcgcgcgccatccac
cagcgctcgccgcgccgtgacggcccgttcgtggcgatcaactgcggcgccattccggcc
gacctgctggaaagcgaactgttcggtcacgaaaagggcgccttcaccggtgcgctcacc
gcgcgcaagggccgtttcgaaatggccgagggcggcaccctgctgctcgatgaaatcggc
gacatgagcctaccgatgcaggtcaagctgctgcgcgtgctgcaggagcgcagcttcgaa
cgcgtgggtggcaaccagaccatccgctgcaacgtgcgcgtcgtcgccgcgacccaccgc
gacctggaaacgcgcattgccgaaggcaagttccgcgaggatctgttctaccgcctcaac
gtgttcccgatcgacgtgccggccctgcgcgaacgccgcgaggacctgccggcgctggtg
gaaaccatcgccgcgcagctggcgcgtaccggccgtggcgaagtgcgcttcaccgcagaa
gccctgcaggccctggccggctacgaatggccgggcaacgtgcgcgaactgaccaacctg
gtcgagcgcctggcggtgctgcacccgggtggctcggtgcgcgtgcaggacctgccggcc
cgctaccggggcgacgccgcgctggcagcagtggccgcgccggcaccggtgcagtccgtc
gccagcgaagaacgcctggacctgcgcagcttctcgttccataccccgggcagcggcaac
cagccggcgctggagcatggcatcgccgtcaatcgtgtagcagcaccggccgccctgccc
gacgaaggcatggacctgcgcaaccacatggccaacatcgaactgggcctgatcaacgaa
gcactggaacgcacccagggcgtggtcgcccacgccgcccagttgcttggcctgcgccgc
accaccctggtggaaaagctgcgcaagtacggcatcgaacgcgagcaggccgaactggcc
ggctga
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