KEGG   Stenotrophomonas forensis: K5L94_13535
Entry
K5L94_13535       CDS       T10605                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
sfoe  Stenotrophomonas forensis
Brite
KEGG Orthology (KO) [BR:sfoe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sfoe02044]
    K5L94_13535 (tssC)
Secretion system [BR:sfoe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   K5L94_13535 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: WDM62157
LinkDB
Position
complement(2910017..2911507)
AA seq 496 aa
MSAEASQLAAQAVETEEVGLLDQIVEKSKVAKSKTEHDRAKDIIAALAKEVLDGTVVVSD
NLNLTLDARIAEIDRIISEQLSAVMHAEPFQKLEGSWRGLHYLCQQTSTGPNMKIKVFNS
PQKDLVKDFKSAIDFDQSALFKKVYEEEFGTFGGAPFGALIGDYFLGRQPEDMYFIEQMS
HVAAAAHAPFISAAGEGMFGLETFTDLGKPRDLAKVFDTVEYAKWKSFRESEDSRYVGLT
MPRFLGRLPYNPKDGTTVEGFNFVEEIEAADHSKFLWCNTAYAMGARLTQAFESFGWCAA
IRGVEGGGLVEDLPTHTFRTDDGEVALKCPTEVAITDRREKELSDLGFMPLVHCKNTDYA
AFFGAQSAQKPKKYNTDSANANAILSAQLQYIFAVSRIAHYLKAMMREKIGSFASAGNVE
EFLNRWIAQYVLLDDNASQEAKAQFPLREASVQVSEVPGKPGVYRAVAFIRPHFQLDELS
VSLRLVAELPASAKKS
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgtcagctgaagccagccagttggccgcccaggccgtcgaaaccgaagaggtgggcctg
ctcgaccagatcgtcgagaagagcaaggtcgccaagtccaagaccgagcatgatcgcgcc
aaggacatcatcgccgccctggcgaaggaagtcctcgacggcaccgtggtggtctccgac
aacctcaacctgacccttgacgcacgcatcgccgagatcgaccggatcatttccgagcag
ctcagcgcggtcatgcatgccgagcccttccagaagctggaaggcagctggcgggggctg
cattacctgtgccagcagacctccactggcccgaacatgaagatcaaggtcttcaattcg
ccgcagaaggacctggtcaaggacttcaagtcggccatcgacttcgaccagagcgcgctg
ttcaagaaggtctacgaggaagaattcggcacgttcggcggtgcaccgttcggcgcgctg
atcggtgactacttcctgggccgccagccggaggacatgtacttcatcgagcagatgtcg
cacgtggccgcagcggcgcatgcgccgttcatttccgcggccggcgaaggcatgttcggc
ctggaaacgttcaccgacctgggcaagccgcgtgacctggccaaggtgttcgacaccgtc
gagtacgccaagtggaagtcgttccgcgagagcgaggacagccgctacgtgggcctgacc
atgccgcgcttcctcggccgcctgccgtacaacccgaaggacggcaccacggtcgagggg
ttcaacttcgtcgaagagatcgaagcggccgaccacagcaagtttctgtggtgcaacacc
gcctacgcgatgggtgcgcgcctgacccaggcgttcgagagcttcggctggtgcgcggcc
atccgcggcgtggagggcggtggcctggtcgaagacctgccgacccataccttccgcacc
gacgatggcgaagtggcgctgaagtgcccgaccgaagtggcgatcaccgatcgtcgtgaa
aaagaactcagtgacctcggcttcatgccgctggtgcactgcaagaacaccgactacgcc
gcgttcttcggcgcacagtcggcacagaagccgaagaagtacaacaccgattcggccaat
gccaacgcgatcctgtctgcacagctgcagtacatcttcgcggtctcgcgcatcgcccat
tacctcaaggcgatgatgcgcgaaaagatcggcagcttcgcttcggcgggcaacgtcgag
gaattcctgaaccgttggattgcccagtacgtactgctggacgataacgcgtcgcaggaa
gccaaggcgcagttcccgctgcgtgaagcctctgtgcaggtttcggaggtgccgggcaag
cccggtgtctaccgcgcggtggccttcatcaggccgcatttccagctcgatgagctgtct
gtttcgttgcgtctggtcgccgaactgccggcgtccgcgaaaaagtcgtaa

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