Stenotrophomonas forensis: K5L94_14005
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Entry
K5L94_14005 CDS
T10605
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sfoe Stenotrophomonas forensis
Pathway
sfoe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sfoe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
K5L94_14005 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfoe03019
]
K5L94_14005 (orn)
03009 Ribosome biogenesis [BR:
sfoe03009
]
K5L94_14005 (orn)
Messenger RNA biogenesis [BR:
sfoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K5L94_14005 (orn)
Ribosome biogenesis [BR:
sfoe03009
]
Eukaryotic type
Pre-60S particles
RNases
K5L94_14005 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Annexin
Motif
Other DBs
NCBI-ProteinID:
WDM62240
UniProt:
A0ABY7XWZ5
LinkDB
All DBs
Position
complement(3010965..3011537)
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AA seq
190 aa
AA seq
DB search
MADNGAANERLIWIDLEMTGLDTDNDSIIEIATVVTDAQLNVLAEGPEFAIHHPVETLEA
MDEWNRNQHRRSGLWQRVVDSTTTLGQAEAQTVNFLAQWIPAGLSPMCGNSICQDRRFLH
RQMPRLEKYFHYRNLDVSTVKELAKRWAPTVAAGVGKNSNHTALSDVHDSIAELRHYRQF
MGALSGLPTA
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacggcgcggccaacgaacgactgatctggatcgacctggaaatgaccggg
ctggataccgacaacgattcgatcatcgagattgccaccgtggtcaccgatgcccagctc
aacgtgctggccgaagggccggagttcgccattcatcacccggtggaaacactggaggcg
atggatgagtggaaccgcaaccagcaccgccgttcgggcctgtggcagcgtgtggtggac
agtaccaccacgcttggccaggccgaggcgcagacggtgaacttcctggcgcagtggatt
ccggccggcctgtcgccgatgtgcggcaactccatctgccaggaccgccgcttcctgcat
cgccagatgccgcgcctggagaagtacttccattaccgcaacctggacgtgtccacggtg
aaggaactggccaagcgctgggcgccgaccgtggccgccggggtcggcaagaacagcaac
cataccgcgctgagcgatgtgcacgactcgatcgccgagctgcgccactaccgccagttc
atgggcgcgctgtcgggcctgccgactgcttga
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