Stenotrophomonas forensis: K5L94_15735
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Entry
K5L94_15735 CDS
T10605
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sfoe Stenotrophomonas forensis
Pathway
sfoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K5L94_15735 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfoe03019
]
K5L94_15735 (pnp)
03016 Transfer RNA biogenesis [BR:
sfoe03016
]
K5L94_15735 (pnp)
Enzymes [BR:
sfoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K5L94_15735 (pnp)
Messenger RNA biogenesis [BR:
sfoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K5L94_15735 (pnp)
Transfer RNA biogenesis [BR:
sfoe03016
]
Prokaryotic type
tRNA degradation factors
K5L94_15735 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_KhpA-B
KH_PNO1_2nd
DUF7680
S1_2
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
WDM62549
UniProt:
A0ABY7XXV3
LinkDB
All DBs
Position
complement(3371886..3373994)
Genome browser
AA seq
702 aa
AA seq
DB search
MAKITKTFQYGKHTVTLETGEVARQASGAVIVKMDDTVLLVTAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYKNEVQIIATVMSLN
PDVDGDIPALIGASAALALAGTPFMGPIGAAKVGYKNGEYILNPTVSELADSQLELVVAG
TSNAVLMVESEAALLSEEVMLGAVTFGHREMQKVINAINELTVEAGTKPSTWEAPAKNDA
LISALKEAIGPRLGEAFQVRDKLQRRDAISAIKKDVVETLAGRVAAEGWNPAELSKEFGE
LEYRTMRDSVLDTKVRIDGRALDTVRPIAVKTGVLPRTHGSSLFTRGETQAIVTITLGTA
RDGQVIDAVAGEYKENFLFHYNFPPFSVGECGRMMGPKRREIGHGRLAKRGVLAVMPSLE
AFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPVKAPVAGIAMGLVKEGERFVVLS
DILGDEDHLGDMDFKVAGTAEGISALQMDIKIEGITEEIMKQALQQAKAGRLHILGEMAH
GLTAPRSELSDYAPRLLTIKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIVIAS
VNAIAAQAAKARIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSDRV
EKVGDVLKEGDVVKVKVLEVDKQGRIRLSMKAVEEGDAVSAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatcaccaaaaccttccagtacggcaagcacaccgtcacgcttgagaccggc
gaagtcgcccgccaggccagcggtgccgtcatcgtcaagatggacgacaccgtactgctg
gtcaccgccgtcgccgccaagagcgcgcgcgaaggccaggacttcttcccgctgaccgtc
gattatcaggaaaagttctacgccggcggccgtatcccgggtggtttcttcaagcgcgaa
ggccgtgcgaccgagaaggaaaccctgatctcgcgtctgatcgaccgtccgatccgcccg
ctgttcccggaagactacaagaacgaagtgcagatcatcgccacggtcatgtcgctgaac
ccggacgtggacggtgacatcccggccctgatcggtgcctcggctgcgctggccctggcc
ggcaccccgttcatgggtccgatcggcgctgccaaggtcggttacaagaacggcgagtac
atcctgaacccgaccgtcagcgaactggctgactcgcagctggaactggtcgtcgccggt
acctccaacgccgtgctgatggtcgaatccgaagctgcgctgctgtccgaagaagtgatg
ctgggcgccgtgaccttcggtcaccgcgagatgcagaaggtcatcaacgcgatcaacgag
ctgaccgtcgaagccggcaccaagccgtcgacctgggaagccccggccaagaacgacgcg
ctgatctccgccctgaaggaagccatcggcccgcgcctgggcgaagccttccaggtgcgc
gacaagctgcagcgccgcgacgccatctcggcgatcaagaaggacgtggtcgaaaccctg
gccggccgtgtggccgccgagggctggaacccggccgagctgtcgaaggaattcggcgag
ctggaataccgcaccatgcgtgactcggtgctggacaccaaggtccgcatcgacggccgt
gcgctggacaccgtccgcccgatcgccgtgaagaccggcgtgctgccgcgtacccacggt
tcctcgctgttcacccgcggcgaaacccaggccatcgtgaccatcaccctgggcaccgcc
cgtgacggccaggtcatcgacgccgttgccggtgagtacaaggaaaacttcctgttccac
tacaacttccctccgttctcggtgggtgagtgcggccgcatgatgggcccgaagcgccgc
gaaatcggccacggtcgcctggccaagcgcggcgtgctggctgtcatgccgtcgctggaa
gccttcccgtacaccatccgcgtcgtctcggaaatcaccgagtcgaacggttcctcgtcg
atggcctcggtctgcggttcgtcgctggccctgatggacgccggcgtgccggtgaaggcg
ccggttgccggtatcgccatgggcctggtcaaggaaggcgagcgcttcgtcgtcctgtcc
gacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtggccggtaccgct
gagggcatctccgccctgcagatggacatcaagatcgaaggcatcaccgaagagatcatg
aagcaggccctgcagcaggccaaggctggccgtctgcatatcctgggcgaaatggcccac
ggcctgaccgccccgcgttcggagctgtccgactacgcgccgcgcctgctgaccatcaag
atccacccggacaagatccgcgaagtgatcggcaagggtggttcgaccatccaggccatc
accaaggaaaccggcacccagatcgacatccaggatgacggcaccatcgtcatcgcttcg
gtcaacgccatcgctgcccaggccgccaaggcccgcatcgagcagatcacctcggacgtc
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggtgcgttcgtc
accatcctgccgggcaaggacggcctggtccacgtctcgcagatctccagcgaccgcgtc
gagaaggtcggcgacgtgctgaaggaaggcgatgtggtcaaggtcaaggtgctggaagtc
gacaagcaggggcgtatccgcctgtcgatgaaggccgtggaagaaggcgacgccgtcagc
gccgagtaa
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