Stenotrophomonas forensis: K5L94_15745
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Entry
K5L94_15745 CDS
T10605
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sfoe Stenotrophomonas forensis
Brite
KEGG Orthology (KO) [BR:
sfoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfoe03016
]
K5L94_15745 (truB)
Enzymes [BR:
sfoe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K5L94_15745 (truB)
Transfer RNA biogenesis [BR:
sfoe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K5L94_15745 (truB)
Prokaryotic type
K5L94_15745 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
WDM62551
UniProt:
A0ABY7XXW1
LinkDB
All DBs
Position
complement(3374581..3375489)
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AA seq
302 aa
AA seq
DB search
MTRIQFRRLDGILLLDKSTGMSSNAALQVARRLFRAEKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLGSAKAYDAEIVLGQTTDTDDSEGQVLLQRPVPAVSAQALQAALAPLTGSILQ
RAPIYSALKQGGEPLYVKARRGDVIEAPEREVQVHAIEVLEQQPERLRLRITCGSGTYIR
SLARDLGESLGCGAHISALRRLWVEPFRAPAMVTLDQLRAMVEAGDEAAMDALLLPLAAG
LAEYPRVDLDADQAHRFCVGQRQRDLSWPRGLVAVFGPDDAVQGLGQVDDSGLLAPQRRF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaattcagttccgccgcctggatggcatcctgctgctcgacaagtcgaccggc
atgagctccaacgccgccctgcaggtggcccgtcgcctgttccgcgccgaaaagggcggt
cacaccggcagcctcgacccgctggccaccggcctgctgccgctgtgcttcggcgaggcg
accaagatcgccggcctgctgctgggctcggccaaggcctacgacgccgagatcgtgctt
gggcagaccaccgataccgacgattccgaaggccaggtgctgctgcagcgcccggtgccg
gcagtcagcgcgcaggccctgcaggccgcgctggcgccgctgaccggcagcatcctgcag
cgggcgccgatctattcggcgctgaagcagggcggtgagccgctgtatgtgaaggcccgc
cgtggcgacgtcatcgaggcgcccgagcgcgaggtgcaggtgcacgccatcgaggtgctg
gagcagcagccggaacggctgcgcctgcgcatcacctgcggctcgggtacctacatccgc
agcctggcccgcgacctcggcgaaagcctgggctgcggtgcccatatcagcgcgctgcgc
cggctctgggtcgaaccgttccgggcgccggcgatggtcaccctggaccagctgcgggcg
atggtcgaggcgggcgacgaggccgccatggatgcgctgctgctgcccctggccgccggc
ctggccgagtacccgcgggtcgacctcgacgccgaccaggctcaccggttctgtgtcggc
cagcgccagcgcgacctgtcctggccgcgcggcctggtcgccgtgttcggcccggacgat
gctgtccaggggctgggccaggtcgatgacagtggcctgctggccccccagcgccgtttc
aacctctga
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