Stenotrophomonas forensis: K5L94_16250
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Entry
K5L94_16250 CDS
T10605
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sfoe Stenotrophomonas forensis
Pathway
sfoe03030
DNA replication
sfoe03430
Mismatch repair
sfoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K5L94_16250 (holA)
03430 Mismatch repair
K5L94_16250 (holA)
03440 Homologous recombination
K5L94_16250 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfoe03032
]
K5L94_16250 (holA)
03400 DNA repair and recombination proteins [BR:
sfoe03400
]
K5L94_16250 (holA)
Enzymes [BR:
sfoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K5L94_16250 (holA)
DNA replication proteins [BR:
sfoe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K5L94_16250 (holA)
DNA repair and recombination proteins [BR:
sfoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K5L94_16250 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
WDM62645
UniProt:
A0ABY7XY46
LinkDB
All DBs
Position
complement(3494447..3495484)
Genome browser
AA seq
345 aa
AA seq
DB search
MELRPEQLASQGADVALAPVYLIAGPETLRVLEAADAIRARARSAGIGEREVFDADGRDF
DWNQLDASFNAPSLFSARRLVEVRLPSGKPGKDGAEVISQFCANPAPDVVLMIIANEWSK
AHQGKWAEAVNRIGVLSVAWAIKPHELPDWIERRLRGKGLRADPAAVQRLAERVEGNLLA
AAQEIDKLALLADGQPLDVERMESLVADAARYDVFRLLEATFSGQPPAVLRMLAGLRGEG
EAVAALMPMVIRELLAGAGLARVQARGGNLAAEMKSRGIWESRQAPYKRALQRHPEGKRW
ERFVAEAGLVDRIAKGRADGDAWLALERLLVAVAEPRAVRLLARA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcgtccggagcagctggccagccagggcgctgatgttgcactggcgccggtc
tatctgattgccggcccggagacgctgcgcgtgctggaggcggccgacgccatccgcgcg
cgtgcgcgcagtgccgggatcggcgagcgcgaggtgttcgacgccgatggccgcgatttc
gactggaaccagcttgacgccagcttcaatgcgccgagcctgttcagcgcccgtcgcctg
gtcgaggtgcgcctgcccagcggcaagccgggcaaggacggcgccgaggtgatcagccag
ttctgcgccaacccggcgccggacgtggtgctgatgatcatcgccaacgaatggagcaag
gcccaccagggcaagtgggccgaggcggtcaaccgcatcggcgtgctgtcggtggcctgg
gcgatcaagccgcacgaactgccggactggatcgagcgccgcctgcgtggcaagggcctg
cgggccgacccggccgccgtgcagcgactggccgagcgggtggaaggcaacctgctggcc
gctgcccaggagatcgacaagctggcattgctggccgatggccagccgctggatgtggaa
cggatggaatcgctggtggccgatgccgcccgctacgacgtgttccggctgctggaggcg
acgttctccggccagccgccggcggtgctgcgcatgctggccggcctgcgcggcgaaggc
gaagcggtggccgcactgatgccgatggtgatccgcgagctgctggccggtgccggcctg
gcccgggtgcaggcgcggggcggcaacctggccgccgaaatgaagtcgcggggcatctgg
gagtcgcgccaggcgccgtacaagcgtgcgctgcagcgccacccggaaggcaagcgctgg
gagcgcttcgtggccgaagccgggctggtcgaccgcatcgccaaggggcgggccgacggc
gatgcctggctggcgctggagcgcctgctggtggccgtggccgaaccgcgtgcggtgcgc
ctgctggcgcgggcctga
DBGET
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