Stenotrophomonas forensis: K5L94_17565
Help
Entry
K5L94_17565 CDS
T10605
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
sfoe Stenotrophomonas forensis
Pathway
sfoe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K5L94_17565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sfoe02022
]
K5L94_17565
02035 Bacterial motility proteins [BR:
sfoe02035
]
K5L94_17565
Two-component system [BR:
sfoe02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
K5L94_17565
Bacterial motility proteins [BR:
sfoe02035
]
Pilus system
Twitching motility proteins
K5L94_17565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_19
HTH_30
HTH_50
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
WDM62898
UniProt:
A0ABY7XYX3
LinkDB
All DBs
Position
3804676..3806049
Genome browser
AA seq
457 aa
AA seq
DB search
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPD
GNGIELVSEIAQHYPRTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHAL
ELNNTERPAPGPSAEQGARLLGDSPAMDVLRTTIGKVARSQAPVYILGESGVGKELVART
IHAQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAPNEEPVDVRILSATHRDLAELVEDGRFRHDLYYR
INVIELKVPPLRERRQDLPELAAAVLARLARSHGRATPLLAPSALEALAQYAFPGNVREL
ENILERALALAEEDCIGADDLRLPQHAPRAPGSAAPAEAVADLQPGSAALPSYIEQLERS
AIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacccgcagcgccctcgtcgtcgacgacgaacgcgacatccgcgaactgctg
gtgctgaccctcggccgcatggggctgcgcatcagtaccgccgccaacctggccgaagca
cgtgaactgctggccagcaatccgtatgacctgtgcatcaccgacatgcgcttgccggat
ggcaacggcatcgaactggtcagcgagatcgcccagcactatccgcgcacgccggtggcg
atgatcactgccttcggcagcatggatctggcggtggaagcgctgaaggccggggccttc
gacttcgtcagcaagccggtggacatctcggtgctgcgcggcctggtcaagcacgcactg
gaactcaacaacaccgaacgccccgcgcccggccccagtgccgaacagggtgcgcgcctg
cttggcgattcgccggccatggacgtgctgcgcaccaccatcggcaaggtcgcgcgcagc
caggcgccggtgtacatcctgggcgagtccggggtgggcaaggagctggtcgcgcgcacc
atccacgcccagggcgcgcgtgcggccggcccgttcgtgccggtcaactgcggcgccatc
cccggcgagctgatggagagtgaattcttcggccatcgcaagggcagcttcagcggcgca
cacgccgacaagccgggcctgttccaggctgcccatggcggcaccctgttcctggacgaa
gtggccgaactgccgctgcagatgcaggtgaagctgctgcgcgcgatccaggaaaaatcg
gtgcgcgcggtcggtgcgcccaacgaggaaccggtggacgtgcggattctctcggccacc
caccgcgacctggcggaactggtcgaagacgggcgcttccgccacgacctgtactaccgc
atcaacgtgatcgaactgaaggtgccgccgctgcgtgagcgccgccaggacctgccggaa
ctggccgcggcagtgctggcgcggctggcccgcagccatggccgcgccaccccgctgctg
gcgccgtcggcactggaggcgctggctcagtatgccttccccggcaatgtgcgcgaactg
gagaacatcctggaacgtgcgctggcattggccgaggaagactgcatcggtgccgatgac
ctgcgcctgccgcagcacgcgccgcgcgcgccgggcagtgccgccccggccgaagcggtg
gccgacctgcagccgggcagcgccgccctgccctcctacatcgagcagctcgagcgcagc
gccatccagcgcgcgctggaagagaaccgctggaacaagacccgcaccgccgcgcagctg
ggcatcaccttccgtgcgctgcgctacaagctgaagaagctgggaatggagtag
DBGET
integrated database retrieval system
