Stenotrophomonas forensis: K5L94_19705
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Entry
K5L94_19705 CDS
T10605
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfoe Stenotrophomonas forensis
Brite
KEGG Orthology (KO) [BR:
sfoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfoe03032
]
K5L94_19705
03400 DNA repair and recombination proteins [BR:
sfoe03400
]
K5L94_19705
Enzymes [BR:
sfoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K5L94_19705
DNA replication proteins [BR:
sfoe03032
]
Prokaryotic type
DNA Topoisomerases
K5L94_19705
DNA repair and recombination proteins [BR:
sfoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K5L94_19705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WDM63300
UniProt:
A0ABY7Y002
LinkDB
All DBs
Position
4288008..4290497
Genome browser
AA seq
829 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDYTVLASYGHVRDLIPKEGAVDPDNGFAMHYDVIDKN
EKHVDAIAKAAKGADDILLATDPDREGEAISWHIAEILKERGLVKDKPMQRVVFTEITPR
AIKEAISQPREIASDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIAREYWSIAAECAHPSQHFNAKLIKLDGQKFEQFTITDGDTAEAARLRIQQ
AAQGSLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVAIGDE
GTVGLISYMRTDSVNLSQDALAEIRDVIARDYGIASLPDQPNTYQTKSKNAQEAHEAVRP
TSALRTPAQVARFLTDDERRLYELIWKRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVPGFLAVYEEGKDSKSAEDEDEGRKLPAMKPGDRVPLERIQAEQHFTQPPPRYTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYVEMEGRSFRPSDVGRAVSKFLSSHFTRYVDYDF
TAKLEDELDAVSRGEEEWIPLMARFWEPFKELVEDKKESVDRAEASGARELGTDPKTGKP
VSVRLGRFGPYAAIGSTAEDAEEKPKFASLRPGQSMHTISLEDALELFLMPRALGEDNGE
PVSVGIGRFGPFAKRGSTYASLKKEDDPYTIDLARAVFLIEEKEEIARNRIIKEFEGSDI
QVLNGRFGPYISDGKMNGKIPKDREPASLTLAEVQQLMEETGKPVRKGFGAKKAAAKKAP
AKKAAVKKEAAPKKAAAKKAPAKKAVKKAAAKKAPAKKAVKKAVKKAAK
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgaatcgccggccaaggccaagacgatcaacaaatac
ctcggcaaggactacacggtcctggcctcgtatgggcatgtgcgtgacctgattccgaag
gaaggcgcggtcgacccggacaacgggttcgccatgcactacgacgtgatcgacaagaac
gagaagcacgtcgatgcgatcgccaaggctgccaagggcgccgacgacatcctgctggca
accgacccggatcgcgagggcgaggcgatcagctggcacatcgccgagatcctgaaggaa
cgcgggctggtcaaggacaagccgatgcagcgcgtggtgttcaccgagatcaccccgcgc
gccatcaaggaggcgatcagccagccacgcgagatcgccagtgacctggtcgatgcccag
caggcgcgccgcgcgctggactacctggtcggtttcaacctgtccccggtcctgtggcgc
aaggtccagcgcggcctgtccgccggccgcgtgcagagcccggcgctgcgcatgatcgtc
gagcgcgaggaagagatcgaagccttcatcgcccgcgaatactggtcgatcgccgccgag
tgcgcgcacccctcgcagcacttcaacgccaagctgatcaagctggacgggcagaagttc
gagcagttcaccatcaccgacggcgacaccgccgaagccgcccgcctgcgcatccagcag
gcggcgcagggctcgctgcatgtcaccgacgtggccagcaaggagcgcaagcgccgccct
gcaccgccgttcaccacctccaccctgcagcaggaagcctcgcgcaagctcggtttcacc
acccgcaagaccatgcaggtggcgcagaagctgtatgaaggcgtggccatcggcgacgaa
ggcaccgtcggcctgatctcgtacatgcgtaccgactcggtgaacctgtcgcaggatgcg
ttggccgagatccgcgacgtgatcgcccgcgattacggcatcgcctcgctgccggaccag
ccgaacacctaccagaccaagtcgaagaacgcccaggaagcgcacgaagccgtacgcccg
acctcggcactgcgtaccccggcccaggtcgcgcggttcctgaccgacgacgagcgccgc
ctgtacgagctgatctggaagcgtgcggtcgcctgccagatgattccggccacgctcaac
acggtcagcgtcgatctgtcggccggcagcgaacacgtattccgcgccagcggcaccacc
gtggtcgtgcccggcttcctggccgtgtacgaggaaggcaaggacagcaagagcgccgag
gacgaagacgaaggccgcaagctgccggcgatgaagcccggcgaccgcgtgccgctggag
cgcatccaggccgagcagcatttcacccagccgccgccgcgctacaccgaagcggcgctg
gtgaaggcgctggaagagtacggcatcggccgtccctcgacctacgcctcgatcatccag
accctgctgttccgcaagtacgtggaaatggaaggccgcagcttccgcccgtccgatgtc
ggccgtgcggtgtccaagttcctgtccagccacttcacccgctacgtggactacgacttc
accgccaagctcgaggacgagctcgacgccgtctcgcgtggcgaggaggagtggatccca
ctgatggcccgcttctgggagccgttcaaggaactggtcgaagacaaaaaggaatcggtc
gaccgtgccgaggccagtggcgcccgcgagctcggcaccgacccgaagaccggcaagccg
gtcagcgtgcggctgggccgcttcgggccgtacgcggccatcggcagcaccgccgaggac
gccgaggaaaagcccaagttcgcctcgctgcgccccggccagtcgatgcacaccatctcc
ctggaagacgcgctggaactgttcctgatgccgcgtgcgctgggcgaggacaacggcgag
ccggtcagcgtcggcattggtcgtttcggtccgttcgccaagcgtggcagcacctatgcc
tcgctgaagaaggaagacgacccgtacaccatcgacctggcccgcgccgtgttcctgatc
gaagagaaggaagagatcgcgcgcaaccggatcatcaaggagttcgagggcagcgacatc
caggtgctgaacggccgcttcggcccgtacatcagcgatggcaagatgaacggcaagatc
cccaaggatcgcgagccggcctcgctgaccctggccgaagtgcagcagctgatggaagaa
accggcaagccggtgcgcaagggcttcggtgccaagaaggccgctgccaagaaggcacct
gccaagaaggcggcggtgaagaaggaagcggcgccgaagaaggccgccgccaagaaggcc
ccggccaagaaagcggtaaagaaggctgccgcgaagaaggccccggccaagaaggccgtg
aagaaggccgtaaagaaggcagccaagtag
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