Stenotrophomonas forensis: K5L94_21430
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Entry
K5L94_21430 CDS
T10605
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sfoe Stenotrophomonas forensis
Pathway
sfoe03030
DNA replication
sfoe03410
Base excision repair
sfoe03420
Nucleotide excision repair
sfoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K5L94_21430 (polA)
03410 Base excision repair
K5L94_21430 (polA)
03420 Nucleotide excision repair
K5L94_21430 (polA)
03440 Homologous recombination
K5L94_21430 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfoe03032
]
K5L94_21430 (polA)
03400 DNA repair and recombination proteins [BR:
sfoe03400
]
K5L94_21430 (polA)
Enzymes [BR:
sfoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K5L94_21430 (polA)
DNA replication proteins [BR:
sfoe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K5L94_21430 (polA)
DNA repair and recombination proteins [BR:
sfoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K5L94_21430 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K5L94_21430 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WDM63623
UniProt:
A0ABY7Y0W6
LinkDB
All DBs
Position
complement(4677150..4679924)
Genome browser
AA seq
924 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLSNAQGEPTGALFGVVNMLRSTLKERPAYVAFVVDAPG
KTFRDDLYDQYKANRPPMPDELRSQVEPMCRIVEALGISILRIPGVEADDVIGTLALQGL
AQDLKVTISTGDKDFAQLVRPGIELVNTMTGSRMDSDAAVMDKFGVRADQIIDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYQHLDGVMAAAPTMKGKIGENLRAALERLPLNRELVTI
RTDVALDASPTTLALREQDVPELTELYTRYGFTQALKELGAPLPAPTAASEATPSLRGTA
AGFARGSAEAPAAGTLDPALAAPGEYETVLTSEQLQAWVERLQQADLISFDTETDALDAM
RARLVGVSLAVEPGRAAYIPVGHDYPGAPAQLPMQQVLDALRPVLQDPAKKKLGQHGKYD
LHVLRRHGVDVQGYHDDTMLESFVLNSTATRHDMDSLALRYLGYSTIKFEDVAGKGAKQI
PFSQVGIDEASRYAAEDADITLRLHHALQPQLLAEPALDSVYRDIEMPLVPVLASIEANG
VRIDTDELRRQSQDLSSRMLAAQQKATELAGRSFNLDSPKQLQAVLFDELKLPAVVKTPK
GQPSTNEEALEAIAEQHELPRVILEYRGLAKLRSTYTDKLPEMVNPDTGRVHTSYHQSGA
ATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPEGCQLLAADYSQIELRIMAHLSEDPGLV
RAFEQGADVHRATAAEVFGRTLEEVTPNERRAAKAINFGLMYGMSAFGLARNLGIDRGQA
QDYVALYFSRYPGVRDFMERMRQQARDQGYVETLFGRRLYLNDIHARNQGLRAGAERAAI
NAPMQGTAADIIKRAMVDVDQWLRDSGAPARMILQVHDELVFETESSFVEDLRLQVVERM
SQAAKLRVPLVVDTGIGSNWDEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtaccgcgcgttccacgcgctg
ccgcccctgtccaatgcacagggtgaacccaccggcgcgctgttcggcgtggtcaacatg
ctgcgctcgacgctgaaggaacgcccggcctacgttgcgttcgtggtcgatgcgcccggc
aagaccttccgtgacgacctgtacgaccagtacaaggccaaccggccgccgatgcccgac
gagctgcgcagccaggtcgaaccgatgtgccgcatcgtcgaggcgctgggcatcagcatc
ctgcgcatccctggcgtggaagccgacgatgtgatcggcacgctggccctgcagggcctg
gcacaggacctgaaagtgaccatctccaccggcgacaaggacttcgcccagctggtgcgt
ccgggcatcgagctggtcaacaccatgaccggcagccgcatggattcggacgcggcggtg
atggacaagttcggcgtgcgtgccgaccagatcatcgacctgctggcgctgatgggtgac
accgtcgacaacgtgccgggcgtggagaagtgcgggccgaagaccgctgccaagtggctg
gccgagtaccagcacctggacggggtgatggcggcagcgccgaccatgaagggcaagatc
ggcgagaacctgcgcgccgcactggagcggctgccgctgaaccgcgagctggtgaccatc
cgcaccgatgtggcactggacgccagcccgaccacgctggccctgcgcgagcaggacgtg
ccggagctgaccgagctgtatacgcgctacggcttcacccaggcgctgaaggaactggga
gcaccgctgccggcgcccaccgctgccagtgaggccaccccgagcctgcgcggtaccgcc
gccggcttcgcccgtggcagcgccgaagcgccggccgccggtacgctggacccggcgctg
gccgcgcccggtgaatacgagacggtgctgaccagcgaacagctgcaggcctgggtcgag
cgcctgcagcaggccgacctgatcagtttcgataccgagaccgatgcgctggacgcgatg
cgtgcgcgcctggtcggcgtcagcctggccgtcgagccgggcagggccgcctacattccg
gtcggccacgactacccgggtgcgccggcccagctgccgatgcagcaggtgctggacgcg
ctgcgcccggtgctgcaggacccggcgaagaagaagctgggccagcacggcaagtacgac
ctgcatgtgctgcgccgccacggcgtggacgtgcagggctaccacgacgacaccatgctc
gagagcttcgtgctcaactccaccgccacccgccacgacatggactcgctggccctgcgc
tacctgggctacagcaccatcaagttcgaggacgtggccggcaagggcgccaagcagatt
ccgttctcgcaggtgggcatcgacgaagccagccgctatgcggccgaggacgccgacatc
accctgcgcctgcaccacgcgctgcagccgcagctgctggccgagccggcgctggacagc
gtgtaccgcgacatcgagatgccgctggtgccggtgctggccagcatcgaagccaatggc
gtgcggatcgacaccgacgaactgcgccggcagagccaggacctgtcctcgcgcatgctg
gccgcgcagcagaaggccaccgagctggccgggcgcagcttcaacctggattcgcccaag
cagttgcaggcggtgctgttcgatgagctgaagctgccggcggtggtgaagacccccaag
ggccagcccagcaccaatgaagaggcgctggaggcgattgccgagcagcacgagctgccg
cgggtgatcctggagtaccgcggcctggccaagctgcgcagcacctacaccgacaagctg
ccggagatggtcaacccggacaccggccgcgtgcacaccagctaccaccagtccggtgcc
gccaccggccgcctgtcctcatcggacccgaacctgcagaacatcccgatccgcaccgag
gacggccgccgcatccgccgcgcgttcgtggcgccggagggctgccagctgctggcggcc
gactattcgcagatcgagctgcggatcatggcccacctgtccgaggacccgggcctggtg
cgcgccttcgaacagggcgccgacgtgcaccgtgccaccgctgccgaggtgttcgggcgc
acgctggaggaggtgaccccgaacgagcgccgtgccgccaaggccatcaacttcggcctg
atgtacggcatgagcgcgttcggcctggcccgcaacctgggcatcgaccgtggccaggcg
caggactacgtggcgctgtacttcagccgctacccgggcgtgcgcgacttcatggagcgg
atgcgccagcaggcccgcgaccagggctacgtggaaaccctgttcggccgccgcctgtac
ctgaacgacattcatgcccgcaaccagggcctgcgcgcgggggctgaacgcgcggcgatc
aacgcgccgatgcagggcaccgccgccgacatcatcaagcgcgcgatggtggacgtggac
cagtggctgcgtgacagcggcgcaccggcacggatgatcctgcaggtgcacgatgaactg
gtgttcgaaaccgaaagcagtttcgttgaagacttgcgtttgcaggtggtggaacgcatg
tcgcaagcggccaaactgcgggtgccgctggtggtcgataccggtatcggcagcaactgg
gacgaggcgcactga
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