Stenotrophomonas forensis: K5L94_21465
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Entry
K5L94_21465 CDS
T10605
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sfoe Stenotrophomonas forensis
Pathway
sfoe03420
Nucleotide excision repair
sfoe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K5L94_21465 (uvrD)
03430 Mismatch repair
K5L94_21465 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfoe03400
]
K5L94_21465 (uvrD)
Enzymes [BR:
sfoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K5L94_21465 (uvrD)
DNA repair and recombination proteins [BR:
sfoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K5L94_21465 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
K5L94_21465 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
DUF3553
Motif
Other DBs
NCBI-ProteinID:
WDM63629
UniProt:
A0ABY7Y0W9
LinkDB
All DBs
Position
complement(4691535..4693727)
Genome browser
AA seq
730 aa
AA seq
DB search
MDVSHLLDGLNPAQREAVSAPPGHHLVLAGAGSGKTRVLTHRIAWLHEVDGVPTHGIFAV
TFTNKAAGEMRHRIDAQLPNGSRGMWIGTFHGLANRLLRLHWQDAKLPEGFQVMDSDDQL
RLVKRVVQALELDDGKYPAKQIAWWINAQKDEGRRPQHIQPEPNDAWLETMRQAYIEYQA
RCDRAGLVDFAELLLRAHELLRDNPALLSHYRARFREILVDEFQDTNAIQYAFVRVLAGD
SGHVFVVGDDDQAIYGWRGAKVENVQGFLRDFPGAQTIRLEQNYRSTANILGAANAVIAH
NPDRIGKQLWTDSGDGEPIDLYAAYNEMDEARYIVERARQWVRDGGSYTEVAVLYRSNAQ
SRALEEALLSEQVPYRVYGGMRFFERAEIKDALAYLRLLSNRNDDAAFERAVNTPTRGIG
DRTLDEVRREARAQGISLWEATMLVTQGSALAARARNALAGFLVLVNELQAQTLHMTLAE
RVDHVLARSQLREHWSKESRNALDSESRTDNLDELVSVASRFVRRADDIEEVGEDMDELV
AFLAYAALEAGEGQAQAGEDGVQLMTLHSAKGLEFPLVFLAGLEEGLFPSARSLEESGRL
EEERRLAYVGITRARQKLVLSYAESRRIHGQDNYSLPSRFLREIPRELLHEVRPKVQVSR
PASLGSSRVMGHASIEAPPLKLGALVTHPKFGEGMVTDYEGSGAHARVQVEFADAGSKWL
VMAYANLTVI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacctgcttgatggcctgaacccggcccagcgcgaagccgtctccgct
ccccccggccaccacctggtgctggccggtgccggttccggcaagacccgcgtactcacc
caccgcatcgcctggctgcatgaagtcgatggcgtgccgacccacggcattttcgcggtg
accttcaccaacaaggcggccggcgaaatgcgccaccgcatcgacgcgcagctgcccaac
ggcagccgcggcatgtggatcggcaccttccacggcctggccaaccgcctgctgcgcctg
cactggcaggacgcgaagctgcccgaaggcttccaggtgatggattcggacgaccagctg
cggctggtcaagcgcgtggtgcaggcgctggaactggacgacggcaagtatccggccaag
cagatcgcgtggtggatcaacgcgcagaaggacgaaggccgccgcccgcagcacatccag
cccgaaccgaacgacgcgtggctggaaaccatgcgccaggcatatatcgagtaccaggca
cgctgcgaccgcgccggcctggtcgacttcgccgagctgctgctgcgcgcgcatgagctg
ctgcgcgacaacccggcgttgctgtcgcattaccgtgcccgcttccgcgagatcctggtg
gacgagttccaggacaccaacgccatccagtacgccttcgtgcgcgtgctggccggtgat
tccggccacgtgttcgtggtcggtgacgacgaccaggccatctatggctggcgcggtgcc
aaggtggagaacgtgcagggcttcctgcgtgacttcccgggcgcgcagaccatccgcctg
gaacagaactaccgctccaccgccaacatcctcggcgccgccaacgcggtgatcgcgcac
aaccccgaccgcatcggcaagcagctgtggaccgacagcggcgacggcgagccgatcgac
ctgtatgccgcgtacaacgagatggacgaagcgcgctatatcgtcgagcgcgcgcgccag
tgggtgcgcgacggtggcagctataccgaagtggccgtgctctaccgcagcaacgcgcag
tcgcgcgcgctggaagaagcgctgctgagcgaacaggtgccgtaccgcgtgtacggcggc
atgcgcttcttcgagcgtgccgaaatcaaggacgcactggcctacctgcgcctgctgtcc
aaccgcaacgatgacgcggcgttcgagcgcgcggtcaacacgcccacccgtggcatcggc
gaccgcacgctggacgaagtgcgccgcgaggcgcgcgcgcagggtatctcgctgtgggaa
gcgaccatgctggtcacccagggcagcgcgctggccgcacgtgcgcgcaatgcgctggcc
ggcttcctggtgctggtcaacgagctacaggcgcagaccctgcacatgaccctggccgag
cgcgtggaccacgtgctggcccgctcgcagctgcgcgagcactggagcaaggaaagccgc
aacgcgctggattcggaatcgcgcaccgacaacctcgacgaactggtctcggtggcctcg
cgcttcgtgcgccgcgccgacgacatcgaggaagtgggcgaggacatggacgagctggtc
gcgttcctggcctatgccgcgctggaggccggtgagggccaggcgcaggcgggcgaggac
ggcgtgcagctgatgaccctgcactcggccaagggcctggaattcccgctggtgttcctg
gccggcctggaagaaggcctgttccccagtgcacgctcgctggaggaaagcggtcggctg
gaagaagagcgccgcctggcctacgtgggcatcacccgtgcgcgccagaagctggtgctg
agctacgccgaatcgcgccgcatccacggccaggacaactacagcctgccctcgcgcttc
ctgcgcgagatcccacgcgagctgctgcacgaagtccgcccgaaggtgcaggtctcgcgg
ccggcctcgttgggcagcagccgggtgatgggccatgcttcgatcgaggcaccgccgctc
aagctcggcgcactggtcacccatcccaagttcggcgaaggcatggtgaccgactacgaa
ggcagcggcgcccacgcgcgcgttcaggtcgaattcgccgacgccggcagcaagtggctg
gtgatggcgtatgccaacctgacggtgatctga
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