Stenotrophomonas forensis: K5L94_21855
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Entry
K5L94_21855 CDS
T10605
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sfoe Stenotrophomonas forensis
Pathway
sfoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K5L94_21855 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfoe03400
]
K5L94_21855 (recC)
Enzymes [BR:
sfoe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K5L94_21855 (recC)
DNA repair and recombination proteins [BR:
sfoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K5L94_21855 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
NNH6
Motif
Other DBs
NCBI-ProteinID:
WDM63691
LinkDB
All DBs
Position
complement(4791263..4794610)
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AA seq
1115 aa
AA seq
DB search
MMSDPGSDFRLYHSNSLDVLAALLARNVRAPVAGQPLLAPEVVLIPQVAMRRWLQATLAA
EFGVAANLEFLTPGEFVARALKANVSGEQDDLDAAGLHWKLYQALRDPALLAQPPMRALQ
SYLAGGDALKPWALAGELASVFEKYQAWRRDWLLRWAAGADPADPQAILWRTITHGHDYR
ARRIQEYLDRFEGAGQPLPKGLPLRMSAFATLNISPDVLRVMATQARVGELHFYMPTPVQ
SYWGDLQTLAERLRSGAPDPFGEAAGENRLLEAWGAAGRDFMAVLGSYEVVHPAGEIAAY
SDPEEDTRPTLDEGGLSDSLLHRLQRDLFHRRALPSGELRDGLRSDDPSLQVHACHTRLR
ELQVLHDQLRSLLQDARFDPPLQAREIAVLAPDIDPYVPYLEAVFGGRGGEEEHIPYALA
DSSPLAGEPLADVFVHLLGLPVSRFGLNEVLDLLASAPLAEAAGLEAVDFDRLHGWLQQA
GARWGLDAKHRDQHQAPADDAYTWQFALDRLVLGHATGSEADLAGVAPWIELEGGALEAL
DRLLRLLRVLAVYQRRLGELLTPAQWRQRLLSLLDALLPTAPSSPNSQRALERLRKLLNQ
FAEDAAKAGFNEGVPPEVVRAHFAGALGEADTRAPLLTGGISFGRMVPMRLLPFRVICVL
GLNDGDFPRRDPAAGLNQLTAELDTPRRRPGDRSTREDDRFLFLQLFAAAQEVFYLSYLG
ADPRDGSVREPSVLVSELIDAAAAYHLDPTMAVRDFTVRHALQPFSPAAFGDGDPRRFSY
RRQWHPAAGRLTGQRGGLLPWFDAPLPPPLDDAVEDEVALDTLRRFLCDPAGQFLAQSLG
LRLADEVEEVDDLEPLVLSSRGPEKRSVQAAVVRATLNGDSEPLYPRLRARGLLPSGALG
ERQFEVEQLKTRPYASALLGWMQGEPLESRRYEVDIDGVRLHGRVADRHPEGLVRLRAGT
LNGNAVIRQGLDWLLANAAGDALPLVQFHDGGDAGPGPHVLPALSVPAARAALRALLQLR
RRGLREPLRFAPYTGWVLYNSAGEKQRSEGWKQWHGSDRSWGESSSDAWQLLLRGADPFA
TDAGYADLLRNSQVVFSAVREGRTLGAEAGQEGRA
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgacccaggcagcgatttccgcctctaccattccaattccctggacgtgctg
gccgcgctgctggcgcgcaatgtgcgtgcgccggtcgcgggccagccgctgttggcaccg
gaagtggtgctgatcccgcaggtggcgatgcggcgctggctgcaagcgacactggccgcc
gagttcggtgttgccgccaacctcgaattcctcaccccgggcgagttcgtggcccgcgcg
ctgaaggccaacgtcagcggcgagcaggacgacctggacgcggccggcctgcactggaag
ctgtaccaggcactgcgcgatccggcgctgctggcacagccaccgatgcgcgcgctgcag
tcctaccttgccggtggcgacgcattgaagccgtgggcgctggctggcgaactggcctcg
gtgttcgagaagtaccaggcctggcgccgcgactggctgctgcgctgggcggccggtgcc
gatccggccgatccgcaggcgatcctgtggcgcaccatcacccatggccacgactaccgt
gcgcgccgcatccaggaatacctggaccgcttcgaaggggcgggccagccgttgccgaag
ggcttgccgctgcgcatgtccgcgttcgcgacgctcaacatctcccccgacgtgctgcgg
gtgatggccacccaggcacgggtgggcgagctgcatttctacatgcccacgcccgtgcag
tcgtactggggcgacctgcagaccctggccgaacgccttcgcagcggcgcgccggatccg
tttggcgaggccgccggcgagaaccgtctgctcgaagcctggggcgccgcgggccgcgac
ttcatggcggtgctgggcagctacgaggtggtgcacccggccggtgagatcgccgcctat
tccgatccggaagaagacacccggccgaccctggacgaaggcggcctgtccgacagcctg
ctgcatcgcctgcaacgcgatctgttccaccgtcgtgcactgccttcgggcgaactgcgc
gatgggctgcgcagcgacgaccccagcctgcaggtacacgcctgccatacccgcctgcgc
gaactgcaggtgctgcacgaccagctgcgcagcctgctgcaggacgcgcgtttcgacccg
ccgctgcaggcacgcgagatcgcggtgctggcgccggacatcgatccctacgtgccgtac
ctggaagccgtgttcggtggccgtggcggcgaggaagagcacattccctatgcgctggcc
gacagcagcccgctggccggcgagccgctggccgatgtgttcgtgcatctgttgggcctg
ccggtctcgcgctttggcctgaacgaagtgctggacctgctggccagcgcaccgctggcc
gaagcggccggcctggaagcggtggacttcgaccgcctgcatggttggctgcagcaggcg
ggtgcgcgctggggcctggacgcgaagcatcgcgaccagcaccaggcaccggccgacgat
gcctacacctggcagttcgcgctggaccggctggtgcttggccatgccaccggcagcgag
gccgacctggccggcgtggcgccgtggatcgagctggagggcggtgcgttggaagcgctg
gaccggctgctgcgcctgttgcgcgtactggcggtctaccagcgtcgactcggcgaactg
ctgaccccggcgcagtggcggcagcgcctgctgtcgctgctggacgcgctgctgccgacc
gcgcccagttcgcccaacagccagcgcgcgctggagcgcctgcgcaagctgctcaaccag
ttcgccgaggacgctgccaaggccggcttcaacgaaggcgtgccaccggaggtggtgcgt
gcgcacttcgccggggcactgggcgaggccgatacgcgcgcaccgttgctgaccggtggc
atcagcttcggccgcatggtgccgatgcgcctgctgccgttccgggtgatctgcgtgctg
ggcctgaatgacggcgatttcccgcgtcgcgacccggccgcgggactcaaccagctcacc
gccgaactggatacaccgcgccgccgcccgggcgaccgctccacccgcgaggacgaccgt
ttcctgttcctgcagctgtttgccgcggcgcaggaggtgttctacctgagctacctgggt
gccgatccgcgagatggcagcgtgcgcgagccgtcggtgctggtcagtgaactgatcgat
gccgccgctgcctatcacctggatccgacgatggcggtgcgcgacttcaccgtgcgccat
gccttgcagccgttctcgcctgctgcgttcggcgatggcgatccgcgtcgattcagctat
cggcggcagtggcatccggcggccggccgcctcaccggccagaggggtggcctgctgccc
tggttcgacgcgccgttgccgccaccgctcgacgatgccgtggaggacgaggtcgcactc
gataccctgcgccgcttcctgtgtgacccggccgggcagttcctggcgcagtcgctgggc
ctgcgcctggccgacgaggtcgaagaggtggatgacctggagccgctggtgctgtcctcg
cgcggcccggaaaagcgcagcgtgcaggcggcggtggtacgggccacgctcaatggcgac
agcgagccgctgtacccgcggttgcgtgcgcgtgggctgttgccgtccggtgcactgggt
gagcgccagttcgaagtggagcagctgaagacccgtccgtatgccagcgcgctgctgggg
tggatgcagggcgaaccattggaaagccgccggtatgaagtcgatatcgacggcgtgcgg
ctgcatggacgggtggccgatcggcatcccgaagggctggtgcgcctgcgcgccggcacc
ctcaacggcaatgcggtgatccgccagggcctggactggctgttggccaacgccgccggc
gatgccctgccgttggtgcagttccacgatggcggcgatgccggcccgggcccgcatgtg
ctgccggcgttgagcgtgcccgctgcacgcgccgcgctgcgcgcgctgctgcagctgcgc
cggcgtggcctgcgtgaaccgctgcgcttcgccccctataccggctgggtgctgtataac
tcggccggcgagaaacagcgcagcgaaggctggaagcagtggcacggcagcgaccgcagc
tggggtgaatccagcagcgacgcttggcagctgctgctgcgcggtgccgacccgttcgcc
accgatgccggctatgccgatctgctgcgcaacagccaggtggtcttcagtgcggtgcgc
gaaggccgcaccctgggcgccgaggcaggccaggagggccgcgcatga
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