Spirosoma foliorum: H3H32_00680
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Entry
H3H32_00680 CDS
T09363
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sfol
Spirosoma foliorum
Pathway
sfol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H3H32_00680 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfol03019
]
H3H32_00680 (rny)
Messenger RNA biogenesis [BR:
sfol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H3H32_00680 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF4954
DUF5662
Ino80_Iec3
Motif
Other DBs
NCBI-ProteinID:
QMW03517
UniProt:
A0A7G5GXC5
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Position
complement(165132..166736)
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AA seq
534 aa
AA seq
DB search
MDIWLTILATLVGGGIGIVIGRQMMATVRGKHEKEAEEKAASILKNAELQAETIKKERML
EAKEKYLKLKTEFEETTNQKRNLLLQNESKLKQREQQLAQQADQQRNREGELNQQRNELG
QQKNSLSQQIEALNKRREDVDRRQQEADRMLADQVAQLEKIAGLSADQAREQLIDTLKAE
AETRASSYIKNIVEEAKLTATKEAKKVVIETIQRTATEHAIENCVSVFNIESDDVKGKVI
GREGRNIRALEAATGVEIIVDDTPEAIIISGFDPVRREIARLSLHRLVQDGRIHPARIEE
IVAKTRKNIEDEIVEIGERTVIDLGIHGLHPELIKMVGRMRFRSSYGQNLLQHSREVAKL
CATMAAELGLNAKLAKRAGLLHDIGKVWPEEAELPHAILGMELAKKYKENPEVINAIGAH
HDEIEMTSMISPIVQVCDAVSGSRPGARREMMESYIKRLKELEELAGNFPGVTKCYAIQA
GRELRIMVDADHVSDERAGVLSYEISQKIEKEMQYPGQIKVTVIREMRAVAYAK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggacatttggttaacaattcttgctaccctcgtagggggtggtattggcatagtgatt
ggccgtcagatgatggcaacggttcgtggaaagcacgaaaaagaagcggaagagaaagca
gcatccattttaaaaaatgctgaattacaggccgaaacgattaagaaagaacgaatgctg
gaggctaaagagaaatatctgaagctgaaaacagagtttgaagaaacaaccaatcagaag
cgaaatctacttttacaaaacgagagtaagctcaaacaacgggaacaacagctcgctcaa
caggccgatcagcaacgcaatcgtgaaggagaattaaatcagcaacgcaacgagctgggt
cagcagaaaaatagcctttcgcagcaaatagaagccctcaataagcgccgtgaagacgtt
gatcgtcgacaacaggaagccgatcgcatgctggccgatcaggtagctcaactcgaaaaa
attgctggtctttcagccgatcaggcccgggagcaactaattgataccctcaaagctgag
gctgaaacccgtgcttcctcctacatcaaaaatatcgttgaagaagccaaattgactgcc
acgaaggaggccaagaaggtcgtcatcgaaaccattcagcgcaccgctaccgaacatgcc
attgagaactgtgtgtcggtttttaacatcgaatcggatgatgttaaaggtaaagtaatc
ggtcgtgaaggccgtaatatccgcgctttagaagcagccactggtgtcgaaattattgtt
gatgatacgcccgaagccatcatcatttcgggctttgaccctgtccgacgggagattgcc
cgcctatctttacaccgtctggtacaggatggtcgtattcaccccgcccgtattgaagag
attgtagccaagactcgcaagaacatcgaagatgaaattgtggagattggcgagcgcaca
gttatcgatcttggtatccacggactccatcccgaactgattaaaatggtaggccggatg
cgtttccggtccagctacggccagaatctgctccagcactcgcgtgaagtagccaagctt
tgcgccacaatggctgccgagttagggctgaatgcgaaattagccaaacgcgcaggcttg
ctccacgatatcggcaaagtatggcccgaagaagccgaactcccccacgctattctgggc
atggaattggcaaaaaaatacaaggaaaatcccgaagtcattaacgccattggtgctcac
cacgacgaaattgagatgaccagcatgatttcgccaatcgttcaggtttgcgatgccgta
tctggctcgcgtccgggtgcccgtcgcgaaatgatggagtcgtatatcaaacgcctgaaa
gaacttgaagaattggcgggcaacttccccggcgttaccaaatgctacgctattcaggcg
ggtcgtgaactgcgaattatggtagatgccgaccacgtttctgacgaacgtgccggagtt
ctttcgtacgaaatctcacagaaaatcgagaaagaaatgcagtatccgggtcaaattaaa
gtgaccgttattcgggaaatgcgggccgtggcttacgcgaagtaa
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