Spirosoma foliorum: H3H32_02285
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Entry
H3H32_02285 CDS
T09363
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sfol
Spirosoma foliorum
Pathway
sfol03030
DNA replication
sfol03430
Mismatch repair
sfol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H3H32_02285 (dnaE)
03430 Mismatch repair
H3H32_02285 (dnaE)
03440 Homologous recombination
H3H32_02285 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfol03032
]
H3H32_02285 (dnaE)
03400 DNA repair and recombination proteins [BR:
sfol03400
]
H3H32_02285 (dnaE)
Enzymes [BR:
sfol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H3H32_02285 (dnaE)
DNA replication proteins [BR:
sfol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H3H32_02285 (dnaE)
DNA repair and recombination proteins [BR:
sfol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H3H32_02285 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
Isochorismatase
T2SSK
DUF6282
Motif
Other DBs
NCBI-ProteinID:
QMW03807
UniProt:
A0A7G5GY65
LinkDB
All DBs
Position
532654..536289
Genome browser
AA seq
1211 aa
AA seq
DB search
MQFSHLHCHTQYSLLDGQADIKKLIKKAKADNMPAVAITDHGNMFGVFEFVAEASKQGIK
PIVGCEFYVVEDHHKKQFTKEQKDVRYHQLLLAKNAQGYKNLAKLCSLGYMEGLYGKYPR
VTKALIDQYKEGLIASTCCIGASVPKTILKKGEEAGEIEFKWWLDRFGEDYYVELQRHEI
PDQIKANEVLIKFARKYNVKIIASNDSHYVDQDDWVAHDILLCVNTNEKQSTPSMKDFSD
DDVMPKNTRFAFFSDQFYFKNTQEMTTLFHDLPEAIDNTNEIVGKVDTLKLKRDIMLPNF
PIPKEFQQHTDDVLNQWEYLRHLTYEGAKQRYVDILPHIQERLDFELFTIRTMGFAGYFL
IVSDFIKAGRDLGVMIGPGRGSAAGSAVAYCTGITNIDPIKYDLLFERFLNPDRKSMPDI
DTDFDDEGRQKVIDYVVQKYGKSQVAQIVTYGTMASKSSIKDVARVMDLPLQDANAVVKL
VPDKPTYNMTLKRIFEDPIDGPGGLASVIQPEEVDNVKRMRALESGDKSAAMAMRIVDYE
KVSAVLKQARKLEGTVRNTGLHAAGIIIAPSDLSDIVPVSTSKDTNLIITQYEGKVIEDA
GVIKMDFLGLRNLTIIKECLRLIRQNYGGFLIDGVETDIDDIPLDDDETYKLFQRGETNA
VFQFESDGMKKHMKDLKPDRFGDLIAMNALYRPGPIAYIPNYINRKHGREEVKYDMPEME
EYLADTYGITVYQEQLMLLSQKLGNFTKGDADILRKAMGKKDKATLDKMKGKFMDGCASN
NLPLKVCEKVWTDWEAFASYAFNKSHSTCYAFVAYQTAYLKAHYRSEYMAAVLTSCLGTI
DKITFFMEECKNINIPVLGPDVNESERFFGVNQKGEIRFGLGGIKGAGDAAVEAIIEERK
AGGPFKDIFDFAIRVNLRTVNKKTWESLAYAGAFDNLDEYHRAQYFNMAEGDTSPFLDKI
IRYANNYHAEKAAAQQSLFGAMMNGEPMLARPKPPTVEEWNQIEKLKFEKDVVGFYITGH
PLDEFKLEMDGFCNCTLANIFETKQPEIKVGGIVSAVQMRVTKSGNPFCIFKIEDYNSSL
EMALFGDDYVRLVQYIEVGRFLHITGKTQNKWGSEQLEFKPVSIRLLNDMREKFCKELRV
SLTLDALNAQVVTKLNELANAHPGTCTLSFNVVDPIERIEISLQARTLKVSPANSFLKAL
EAIDGVTCKVA
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctcacaccttcactgccacacgcaatactcgctgctcgacggtcaagccgac
attaagaagctgattaagaaggcaaaagccgacaatatgcctgccgtcgctatcaccgac
cacggcaacatgttcggggtatttgagttcgtagcagaagccagcaagcagggcatcaag
ccgattgtgggatgtgaattctacgtggtggaggatcaccataaaaagcagtttaccaag
gagcagaaagacgtccgataccaccagttgttgttggctaagaacgcacagggttataaa
aacctggcgaaactctgctcattggggtatatggagggtttgtacggtaaatacccccgt
gttaccaaagcacttatcgaccaatataaagaagggttgattgcatccacctgttgcatc
ggtgcgtcggttccgaaaacaattcttaaaaaaggcgaagaagcgggcgaaattgaattc
aaatggtggctcgaccgctttggggaggattattatgttgaactccaacgtcatgaaatt
cctgatcagatcaaagccaacgaagtactgatcaagtttgcccggaaatataacgtcaag
attattgcgtccaacgattcgcactatgtcgatcaagacgactgggtagcgcatgatatc
ttgctgtgtgtcaacaccaacgaaaagcaaagcacgccgtcgatgaaggatttcagcgat
gacgatgtgatgcctaaaaatacacgctttgctttcttcagcgatcagttctatttcaag
aacacgcaggagatgaccacgctcttccacgacctgcccgaagccatcgacaacaccaat
gagattgttggcaaagtggatacgctgaagttgaagcgcgatattatgctgcccaacttt
cccattccgaaggagtttcagcaacataccgatgatgtactcaaccagtgggaatacctg
cgccaccttacgtatgaaggggctaagcaacgctatgtagatattctgccgcatattcag
gagcgccttgattttgaattgtttacaatcagaacgatgggtttcgcgggttacttcctg
atcgtgtctgacttcatcaaagcgggtcgcgatttgggggttatgattggccctggtcgt
ggttcagcggctggtagtgcggtggcgtattgtaccggcattaccaacattgacccgatt
aaatacgacttgctgttcgagcggtttctgaaccccgaccggaagtcgatgcccgatatc
gatacggactttgatgatgaaggccgccagaaggtgattgactacgtggtgcagaagtac
ggcaaatcgcaggtggcgcagattgtgacctacggtaccatggcttcgaaatcgtcgatc
aaagacgttgcgcgggttatggatttgcctctgcaggatgccaacgccgtggtgaagctc
gtgcccgacaagccgacctacaacatgaccctcaagcgcatcttcgaagatccaattgac
gggccgggtggattagccagcgttattcagcccgaagaggtcgataacgtgaagcgcatg
cgtgcccttgaatcgggcgacaaaagcgcggctatggccatgcgcattgtcgattacgaa
aaggtgtcggctgtactcaaacaagcccgaaaacttgaaggaactgttcgtaatacggga
ctgcacgcagctggaattatcatcgctcccagcgatttgtcggatattgttccggtatcg
acctcaaaagatacgaacctgattattacccagtatgagggtaaagttattgaggatgcg
ggcgtaattaagatggactttttgggtctgcgcaacttgactatcatcaaggagtgcctc
cgactcatccggcaaaattatggtggtttcctcatcgatggcgtcgaaactgacatcgat
gatattccactagacgacgacgaaacctacaaactcttccagcggggcgaaaccaacgcc
gtattccagtttgaatccgacggcatgaaaaagcacatgaaagacctgaagcctgaccgc
tttggtgacctcattgctatgaacgccctctaccgtccgggcccgattgcctacattccg
aactacatcaaccgtaaacatggtcgcgaagaagtcaaatacgatatgccagaaatggag
gagtatttggctgacacctacgggattacagtttatcaggagcagttaatgctgctctcg
caaaagctgggcaacttcaccaaaggcgacgctgatattctgcggaaggcgatggggaag
aaggacaaagccacgctggataaaatgaagggtaagtttatggatggttgtgcatccaac
aatttgcccctgaaagtttgtgaaaaagtctggaccgactgggaggccttcgcgtcgtac
gcctttaacaaatcgcactcgacctgctacgccttcgttgcctatcaaacggcttacctc
aaagcccattaccgttcggagtatatggcggccgttttgacaagctgcctgggtacgatc
gataaaattacgttcttcatggaggaatgtaagaatatcaacattcccgttcttgggccc
gatgtaaacgaatcagagcgtttctttggggttaaccaaaaaggggaaattcgttttgga
ttaggtggtatcaaaggagcgggtgatgcggctgtcgaagccattattgaggaaagaaaa
gcaggtgggcccttcaaggacatcttcgactttgccattcgggtcaacctccgaaccgtg
aacaagaaaacctgggaatcgctggcctatgcgggtgcgttcgataacctcgacgagtac
caccgggcgcagtatttcaacatggccgaaggtgatacatcgccatttctggataaaatc
attcggtacgccaacaactaccacgctgagaaagccgctgcccaacagtcgctgtttggg
gctatgatgaatggcgaacccatgctcgcccggcctaaacctcctacggtagaagagtgg
aaccagatcgaaaaactgaagtttgagaaagacgttgtcggcttttatatcacaggccat
ccactcgacgaattcaaactcgaaatggacggattctgtaattgtacactggccaatatt
ttcgaaaccaaacaacctgaaattaaagttgggggcattgtgtccgcagtgcaaatgcgg
gtaactaaaagcggtaacccgttctgtatcttcaagatagaagactacaactcgtccctc
gaaatggccctgttcggagatgattacgtccgactggtgcaatacattgaggtgggtcgc
ttcctgcacattacaggcaaaacccagaacaaatggggttcggaacaattggaattcaag
cctgtaagtatccgattgttgaacgacatgcgtgaaaaattctgcaaagaattacgtgtc
tccttaactctcgatgccttgaatgcccaggtcgttacgaagctcaacgagttggccaat
gcgcaccccggcacctgtacactttcctttaacgttgtcgacccaatcgagcgcatcgag
atcagtttacaggcaagaacgctgaaagtttcaccagccaactcgttcctgaaggcgttg
gaagccattgatggcgtgacgtgtaaggtggcgtag
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