Spirosoma foliorum: H3H32_12485
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Entry
H3H32_12485 CDS
T09363
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfol
Spirosoma foliorum
Brite
KEGG Orthology (KO) [BR:
sfol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfol03032
]
H3H32_12485 (topA)
03400 DNA repair and recombination proteins [BR:
sfol03400
]
H3H32_12485 (topA)
Enzymes [BR:
sfol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H3H32_12485 (topA)
DNA replication proteins [BR:
sfol03032
]
Prokaryotic type
DNA Topoisomerases
H3H32_12485 (topA)
DNA repair and recombination proteins [BR:
sfol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H3H32_12485 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QMW05641
UniProt:
A0A7G5H3E9
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Position
complement(2977098..2979752)
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AA seq
884 aa
AA seq
DB search
MSKNLVIVESPAKAKTIEGYLGNDFTVKSSFGHVRDLPKDGLAVDVTNGFQPSYEISPDK
KKLVSELKALAKSADEVWLATDDDREGEAISWHLKEALGLRDNTKRIVFREITKNAIQNA
IKSPRTIDVDLVNAQQARRVLDRLVGYELSPVLWRKIKGGSTGLSAGRVQSVALRLVVER
EREIDKHSAKSSFKVTAQFIVDGTKVLNAELPKNFATSGQARAFLEACIGATFTIKNLEV
KPAKKSPAPPFTTSTLQQEASRKLSYSVDRTMRIAQNLYEAGKISYMRTDSTNLSTEAID
KAVAEIGSEFGQKYIQTRQFKTKNESAQEAHEAIRPTNFNDRNAGADRDQKRLYELIWKR
AIASQMADAQLERTTVTISIRFANGATTTVQAHVDDSPFVDTPPATQTQQFPNELVAQGE
VIKFDGFLRVYLESKDDEDDEDAKGMLPPLTIGQSLNLGQMKATEKFTRPQPRYAEASLV
KKLEEMGIGRPSTYAPTISTIINRGYVVKQDKPGQERKYIEYTLQQNNISETSGKETFGS
EKAKLFPTNTGIVVNDFLVEYFPDIVDYQFTATVEKEFDEIADGKMNWKAMLEGFYGDFH
KNIEDIQGSSIVSFKTGAKELGLDPRTGKKVSARLGKYGAYAQIGESTDDEKPQYANLRD
GQLIETITLQEALDLFTLPREVGFFEDKPMVIGIGKFGPYVKHDDKYVSLTKEDDPYSID
ADRTIQLIQQKRAEAVSEAIGEYEGKPVTTGKGRFGPYVKYEDKYISIPRNESLAGMTLD
RAIELILAKRQAEANKYIKEFPENPAVKVVNGQYGPYLAVGKRNVKIPKDVDPASLTLED
CLKLAGDEPAPAKKAAPAKATKAAATPAKKPAAKAPAKKAAAKK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaacttagtcatagtagagtcgccagcgaaggcgaaaaccatcgaaggctac
ctcggtaatgactttacagtgaagtctagctttggtcatgtacgcgatctgcccaaagat
ggtttggccgtggacgttaccaatggattccagccctcgtacgaaatttcacccgataaa
aagaagcttgtcagtgaattaaaggcgcttgcaaagtcggctgatgaggtctggctggca
acggatgatgaccgcgagggagaagctatttcgtggcaccttaaggaagcccttggcctt
cgggataataccaaacgaatcgtctttcgggaaattaccaaaaatgcgattcagaatgcg
attaaatcgccccgcaccattgacgtagacttagttaatgcccaacaggcccggcgcgta
ctcgaccgcttagtcggttacgaactgtcgccggtgttatggcgcaaaattaaaggtggt
agcacgggcttatcggctggtcgtgtgcaatcggtagcgttgcggctcgtggtagagcgc
gagcgggaaattgataagcactccgccaaatcttcctttaaagttacggctcagtttatc
gttgatggaacgaaggtcctgaacgctgaactaccaaagaattttgcgacttcgggtcag
gctcgggcgtttctggaagcgtgtattggggcgacttttacgattaagaatctggaagtt
aagcccgctaaaaaatcccctgcaccgccctttacgacctcaacgctgcaacaggaagcc
tctcggaagctgagttattcggtggatcggacgatgcggattgcccagaatctgtacgaa
gcaggtaagatttcgtacatgcgtaccgactccaccaacctttcgaccgaagctatcgat
aaagcggttgctgagattgggtctgaatttggtcagaaatatatccagacccgccagttc
aagaccaagaacgagtcggcacaggaagcgcacgaagccattcgcccaacgaatttcaac
gaccgaaacgctggtgctgatcgcgatcagaaacggctgtatgaattgatctggaaacgg
gctattgcttcgcaaatggctgatgctcaattggagcgcacgaccgtaacaatcagcatt
cgattcgctaatggagcaacgactaccgttcaggcgcatgtcgatgatagcccatttgtc
gatactcctccagcaacccaaacgcagcagtttccgaatgaactggttgcgcagggtgaa
gtcattaagttcgatggcttcctgcgggtttacctcgaatcgaaggatgacgaggatgat
gaagatgccaaaggcatgttaccacctctgacgattgggcaaagtctgaatcttggtcag
atgaaagccaccgagaaatttacgcgtccgcagcctcgctatgcggaagcctcgctggtg
aaaaaactggaagaaatgggcataggtcgtccatcgacctatgcaccgaccatttcgacc
atcattaaccgaggttacgtcgttaagcaggataagccggggcaggagcggaaatacatc
gagtacactctccagcaaaacaacatcagcgaaaccagcggtaaggaaaccttcggctcc
gaaaaagctaagctatttccaaccaatacgggtatcgtcgtcaatgattttctggttgaa
tatttcccggacatcgtagattatcagttcacggcaaccgtagagaaagagtttgacgaa
attgctgatggcaaaatgaactggaaggcgatgctcgaagggttctacggcgatttccat
aaaaacatcgaagatattcagggttcgtcgatcgtttcgtttaaaacgggtgctaaagag
ttaggactcgatcctcgaacgggcaagaaagtatcggcccgattgggtaaatacggtgct
tatgcccagatcggtgaatcgactgacgacgagaaaccacaatacgctaacctacgtgat
ggtcaactaattgaaaccatcaccttacaggaagcactggatttatttacacttccccgt
gaggttggcttctttgaggataaaccgatggtcatcggtattggtaagtttggcccctac
gtgaagcacgatgataaatatgtgtcgctgacgaaagaagacgatccatattcgattgat
gcagaccggactattcagcttattcaacagaaacgtgccgaagcagttagtgaagccatt
ggtgaatacgagggcaagcctgttacaactgggaaaggacgttttgggccgtatgtgaaa
tacgaagacaagtacatttcgataccccggaatgaatcactggctggcatgacgctggat
cgagctatcgagttgattctggccaagcggcaagccgaagccaataaatacatcaaagag
tttccggagaatccggcggtgaaagttgtaaatgggcaatacgggccgtatctggccgtt
ggcaagcgaaacgtcaaaattcccaaagacgttgacccggcttcgttaacgctcgaagac
tgtctgaaactcgcgggcgatgaacccgctcctgcgaaaaaagcagccccggctaaagca
acaaaggcagctgcaacacctgccaagaagcccgcggccaaagcgccggcgaagaaggca
gccgcaaaaaagtaa
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