Spirosoma foliorum: H3H32_19020
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Entry
H3H32_19020 CDS
T09363
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sfol
Spirosoma foliorum
Pathway
sfol03410
Base excision repair
sfol03430
Mismatch repair
sfol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H3H32_19020 (recJ)
03430 Mismatch repair
H3H32_19020 (recJ)
03440 Homologous recombination
H3H32_19020 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfol03400
]
H3H32_19020 (recJ)
DNA repair and recombination proteins [BR:
sfol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
H3H32_19020 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H3H32_19020 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H3H32_19020 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QMW00125
UniProt:
A0A7G5GMN3
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All DBs
Position
complement(4470405..4472144)
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AA seq
579 aa
AA seq
DB search
MIAQPSPPPKRWIPKPFPDSKEQQTAIQSLTQSLGISPFLAALLVQRGVTTYDDARVFFR
PEISHLHNPFEMKDMDRAIMRLQMAMLPEREEKILIYGDYDVDGTTSVALVYGFLKNYHT
KIDYYIPDRYKEGYGISRQGIEWAAENGFSLIIALDCGIKSIERVAEAKALGVDFIICDH
HRPGDELPDAAAVLDPKRADCSYPYKELSGCGVGFKLLQAFCMHKGIEPEKLYPCLDLVA
VSIASDIVPLTGENRVLAYYGLKYLNAEPRTGLKALIKIAGFTRELDITNVVFGLGPRIN
AAGRIQHAKAAVQLLLAESEEEADEFAMAINKHNNSRREFDSSITEQALAMIRESDVLTH
AKSTVLFDASWHKGVIGIVASRCIEHFHRPTIILTQSNDKAAGSARSVPGFDVYEAIEEC
ADLLEQFGGHTFAAGMTMSVSNIDAFRRKFEEVVARTIKEEHLTPLIDIDLPLDFSEISD
KLVRIVKQMGPFGPHNLQPTFMTNDVYLAAEPIIMKEKHLKISVRQGRSGHTLTAIGFGF
AHMADQLRAGRPFSICYQVEQNFFNGNVSLQLMLKDLKV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgatagcccagccgtccccaccacctaaacgatggatacccaaaccgttccctgactcg
aaggagcagcaaactgctattcagtcgttaacgcagtcattgggcatcagtccatttctg
gcggctttgctggttcagcgaggtgtcacaacctacgatgatgcgcgcgttttttttcgg
cccgaaattagtcatttgcataatccgttcgagatgaaggatatggatcgggctattatg
cgccttcaaatggccatgctgcccgaacgggaggagaaaatcctgatctatggcgactac
gatgtagacggcacgacttcggtagcattggtatatggctttctgaaaaactatcacaca
aagatagattattatattcccgaccgatataaggaaggttacgggatctcacgacaggga
atcgagtgggccgccgagaatgggttttcgttgattattgccctcgactgtggcattaaa
tcaattgagcgtgtggccgaagcgaaagcgcttggcgtcgattttattatctgcgatcac
caccgccctggcgacgaactacccgatgcggctgctgtgctggaccctaaacgcgctgat
tgctcgtatccttataaagagttgagtggatgtggagttggctttaagctgcttcaggcg
ttttgcatgcacaagggcattgaacctgaaaaactctatccctgcctcgatttagtagcc
gttagtattgcctcagacattgtaccgcttacgggcgagaatagggtgttggcgtactat
ggcttaaaatatcttaacgcagaaccacgaactgggctgaaagcgttaatcaaaatagcg
ggctttacgcgggagctggacattacgaatgtggtttttggtttagggccgcgaatcaac
gcagctggccgaattcagcatgcgaaagcggctgttcaactactgttggccgaatcggag
gaagaagccgacgagtttgcgatggcaattaataagcataacaatagccgacgcgaattc
gatagtagcattaccgaacaggcgttggcaatgattcgggagagtgatgtgctaactcat
gccaagagtacggttttgtttgatgccagctggcataaaggggtaattggcattgtggcg
tcgcgctgtatcgagcattttcatcggccaacgattatcctgacccagtcgaacgataag
gcggctggatcagcacggtcggtgccggggtttgatgtgtacgaagctattgaagaatgt
gccgatttgctggaacagtttggcggtcacacgtttgcagcaggtatgaccatgtcggtt
agcaatattgatgcgtttcggcggaagtttgaagaggttgttgcccggacgattaaagaa
gaacacctaactccgctaattgacattgacctcccattggacttcagtgaaattagcgat
aagcttgtccggattgtgaagcagatggggccttttggtccacataacctgcaaccgacc
tttatgacaaacgatgtgtatctggctgccgaacccattattatgaaggaaaagcatctg
aaaataagtgtacggcagggaagatcggggcacacattgacggccatcgggtttgggttt
gcgcacatggcagatcagctcagggccggcagacctttttcaatctgttatcaggtagag
cagaatttttttaacggaaatgtctctttgcagttaatgcttaaagatttaaaagtgtag
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