Spirosoma foliorum: H3H32_20800
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Entry
H3H32_20800 CDS
T09363
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfol
Spirosoma foliorum
Brite
KEGG Orthology (KO) [BR:
sfol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfol03032
]
H3H32_20800
03400 DNA repair and recombination proteins [BR:
sfol03400
]
H3H32_20800
Enzymes [BR:
sfol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H3H32_20800
DNA replication proteins [BR:
sfol03032
]
Prokaryotic type
DNA Topoisomerases
H3H32_20800
DNA repair and recombination proteins [BR:
sfol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H3H32_20800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QMW00445
UniProt:
A0A7G5GNK3
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All DBs
Position
4881837..4882904
Genome browser
AA seq
355 aa
AA seq
DB search
MNLLELAHSPALVAKAARLVYMNDTMPGIHRQRTGSQFTYVDPAGQKLEDEETLARIRSM
TLPPAWEDVWISPKANGHLQATGIDTKHRKQYRYHTKWNAIRSETKFFRMVAFGQALPLL
RARLAKDLKVKTLSREKVIAIALSVMEQTLIRVGNAAYEKEYGSYGLTTLKNRHVKLEGS
EARFSFKGKKGIYHDITLHDKRLSRLVKACRDIPGKELFQYFDQDGNRHSIDSGMVNEYL
HETMGDDFSAKDFRTWAGTANALRLLVELEPCDTEKELKKNVNTVLDEVAHQLGNTRTVC
RKHYVHPQILEAYECQDLNPYIKQKARFRQTSPFGLDGIEKLLLKFLKDQVKLVK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattggagttagcgcatagtccagccctggtcgctaaggccgcccggctggtg
tatatgaatgatacaatgccgggcattcatcgccagcgaactggcagtcagtttacgtat
gttgatcctgctggccaaaaactggaggacgaagaaaccctggcccgaattcgtagcatg
actctaccccctgcctgggaggacgtctggatcagccccaaggctaatggccatttacag
gcaactggtatcgatactaaacatcgaaagcagtaccgctaccatacaaaatggaatgcg
attcgaagcgaaacaaaattttttcggatggttgcttttgggcaagcactgcctttactg
cgggcacgtttagccaaggatttaaaagtgaagacgctttcccgcgaaaaagtaattgcg
attgcgctcagtgttatggaacaaaccctaattagggtaggtaatgcagcctatgaaaaa
gaatatggttcctatggtctgacaacgctaaaaaacaggcatgtcaagctcgaaggcagc
gaagcacggtttagttttaaaggtaaaaaaggcatctatcacgacattacactacacgat
aagcgactatctcgcttagtcaaagcttgccgcgatattcctggaaaagaattatttcaa
tatttcgatcaggatggtaatcgccattccattgactcaggtatggtgaatgagtatctg
cacgaaacaatgggcgacgatttttcggcgaaagacttccgcacctgggcaggcaccgcc
aatgccttacgacttttagttgaattggagccttgcgatacggaaaaagaattaaagaaa
aatgtaaatacggtgctggatgaagtggcacatcaattaggcaacacccgcactgtttgc
cgaaaacattatgttcatccgcaaattctggaggcttatgaatgtcaggatcttaatcca
tatatcaaacaaaaagcccgatttcgccaaaccagtccttttggcctcgatggtattgag
aagctactgctaaaatttctcaaagatcaggtaaagttggtgaagtaa
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