Spirosoma foliorum: H3H32_30530
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Entry
H3H32_30530 CDS
T09363
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sfol
Spirosoma foliorum
Pathway
sfol03420
Nucleotide excision repair
sfol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H3H32_30530
03430 Mismatch repair
H3H32_30530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfol03400
]
H3H32_30530
Enzymes [BR:
sfol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H3H32_30530
DNA repair and recombination proteins [BR:
sfol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H3H32_30530
MMR (mismatch excision repair)
Other MMR factors
H3H32_30530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QMW02215
UniProt:
A0A7G5GTM3
LinkDB
All DBs
Position
complement(7261515..7263818)
Genome browser
AA seq
767 aa
AA seq
DB search
MVDYISGLNDPQREAVMHGSGPLMIIAGAGSGKTRVLTYRIAHLIDNGVDPFRILSLTFT
NKAAGEMRHRIEKVVGTEARNIWMGTFHSVFAKILRIEAKAIGYTSNFSIYDSDDSKSLL
RSIIKEMALDDKVYRVNSVFSRISGAKNRLIGPDDYLNNSVIQADDESARMPHIGKIYKQ
YALRCFAANAMDFDDLLFNTNVLFRDHLDILNKYQHKFQYVMVDEFQDTNVSQYLITRKL
AAVHQNICIVGDDAQSIYAFRGANIENILNFQRDYGKENVKIVKLEENYRSTNTIVQAAN
SIIARNKNQLEKHVFTSNEEGPLIDVIKASSDNEEGRLVASAIFETKMNESLVNNDFAIL
YRTNAQSRAFEEALRKVSLKYRIIGGLSFYQRKEIKDLIAYLRFVVNQQDEEAFKRIINL
PKRGIGDTTIAKLSVIAAEQEDSIWEIVANITKYVAGRASFAIENFATLIKSFKLLLDQK
DAFEVASHIAKTSGLLKELYDDKTVEGLARYENVQELLNAIKEFVDNPDNEDKSLATFLQ
SVSLLTTADEKEDDGDNDRITLMTIHSAKGLEFKNVHIVGLEEDLFPSQMMLESRNDLEE
ERRLFYVAITRAEKRLTISYAETRYHYGRLKMCEPSRFLMEIDQKYMKVSKQRSAPSRLD
FDRPERPNRDRSESTSTGSMAFVRSLAQKTAQRQTPQQAASHTPSPDFAPTSTAELASGQ
RVEHAKFGFGTVKKVEVNGTERKATIQFEQVGEKVLLLSFAKLRVVV
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggttgattatatttctggattaaatgaccctcagcgggaagccgtcatgcacggcagt
ggcccgctaatgattatagctggtgctggctcgggaaaaacccgtgttctgacgtaccgg
attgctcacctgattgacaatggagttgatccctttcggattttatcgctgacgtttacc
aataaggccgctggtgaaatgcgccatcggatcgaaaaagttgttggtacagaagcacgc
aacatctggatgggtacgttccactcagtgtttgccaagattttacgcatcgaagccaaa
gcgattggttataccagcaatttctccatttatgatagcgatgactctaaatcgcttttg
cgaagtatcattaaagaaatggcgctggacgacaaggtctatcgtgtcaacagcgttttc
agccggatttcaggtgccaagaaccgcctaattggtccagatgattatctgaacaattca
gttattcaggccgatgacgagtcggcgcggatgccgcacattggcaaaatctataaacag
tacgcacttcgctgttttgcggccaatgcgatggattttgatgatctgttgttcaacacg
aatgtgctgtttcgcgatcatttagatattctgaataaataccagcacaagtttcagtac
gtaatggtcgatgagtttcaggatactaacgtatcgcagtatctcattacccgaaaactg
gcggctgttcaccagaacatttgtatcgtgggcgacgatgcccagagtatttacgcgttc
cggggtgccaacatcgagaacatcctgaatttccagcgcgattatggcaaagaaaacgtt
aagatcgtaaagctggaggagaattaccgatcgaccaatacgattgtacaggcggcaaat
tctattatcgcccgcaacaaaaatcagttagaaaagcacgtctttacctccaatgaagaa
ggcccgctgatcgacgtgattaaggcatcgtcggataacgaagaagggcgtttggtagcc
tcggccatttttgagactaaaatgaacgaatcgctcgtgaacaacgacttcgcgattcta
taccgtaccaacgcccagtcgcgggcatttgaagaagcgctacgaaaagtgagccttaaa
taccgcattattgggggcttgtctttctaccagcgcaaagaaattaaagatcttattgcc
tacctacgctttgtagttaaccaacaggacgaagaagccttcaaacggattatcaattta
cccaaacgcggaatcggcgacacaaccattgctaaacttagcgttattgccgccgaacag
gaggattctatctgggaaattgtggccaacatcaccaagtatgttgctggtcgggcctcg
tttgccattgagaacttcgccacattgatcaagagtttcaaactgctgctcgatcagaaa
gatgcgtttgaagtagcctcgcatatcgctaaaacgtcgggcttattgaaagagctttac
gatgacaaaacggttgaagggctggctcgctacgaaaacgtccaggaattgctgaacgcc
attaaggagtttgtcgataatcccgataacgaagacaagagccttgccacgtttctacaa
tcggtctcgttgcttacaactgccgatgagaaggaagatgacggtgataacgaccgaata
acattgatgactatccactccgctaaaggactggaattcaaaaacgtgcatatcgttggt
ttagaagaagatctcttcccaagccagatgatgctcgaaagccgaaatgacctagaagaa
gaacgtcgattgttttatgtggccattacccgtgccgaaaagcggttgacgatttcttac
gccgaaacacgctaccattatggtcgactaaaaatgtgcgagccaagtcggtttctgatg
gaaatcgatcagaaatacatgaaagtgtcgaaacaacgatcggccccaagccgactggac
ttcgaccggcccgagcgccccaatcgagatcgtagcgaaagtacgtcaacagggtcgatg
gcctttgttcgctccttagcgcagaaaacagcccaacgacaaactcctcaacaggccgct
tcgcatactccttcgcccgatttcgcacccaccagcacggcagagcttgcttctgggcaa
cgcgttgaacatgcgaagtttggttttggtacggtaaaaaaagtagaggttaacggcact
gaacgtaaagccactatccagtttgagcaagtgggcgaaaaagtgttgttgctgagcttc
gcgaaattgcgggttgtagtataa
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