Salvelinus fontinalis (brook trout): 129810560
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Entry
129810560 CDS
T11136
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129810560
04020 Calcium signaling pathway
129810560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129810560
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129810560
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
129810560
NCBI-ProteinID:
XP_055717151
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Position
14:28003012..28235559
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AA seq
2488 aa
AA seq
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MLELGSCSVSAQTLADHNALGVPHLARGSVCGSSNPRQYDLHPESENWRKHRLGLAEGSH
SCSLLEPQSLSDSLLSHTASFNTLYLPHNAHTPHGLSLDVGSSYDRAGEALVMDPDRPVS
PIVIKRRRGGLIEQRDIVKAHQAHKIQSTPQALRKEWEMARFGDDVPGLLGSGDGGSERN
RTREGPALSTGGGVSPAFKQTKAQRARTMALYNPIPVRQNCFTVNRSLFIFGEDNIVRKY
AKKVIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMSKRLEKTEPYFIGMFCFEAGI
KVVALGFVLHKGSYLRNGWNVMDFIVVLSGILATAGAHMNIPVDLRTLRAVRVLRPLKLV
SGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHNTCLPMPNILENE
TVDKSESEFPCGVRKCPDKYACSETWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLY
NTNDALGPTWNCMYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQI
ERELNGYRAWIDRAEEVMLAEENKNLGPSALDAPKRLSEWNTGGNHVLKRATIKRRGVDA
VHRGPEEEQYGDISSVGIPMTRASIRSAKRGPTAYFKRKERLLRISIRRMVKTHTFYWTV
LGLVALNTLCVAIVHHNQPHWLSVFLYYAEFLFLGLFLTEMCLKMYSLGPRLYFHSAFNR
FDCGVIVGSIFEVMWGFFRPDMSFGISVLRALRLLRIFKITKYWASLRNLVVSLMNSMKS
IISLIFLLFLFILVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVM
YNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEDEEAAF
NQKHALQKAKEVGAMSSLMSSHRRRRPYLYRKRAIHRSRPAYSLEEAESLAEGPPCPPLN
SSNSFMSRGERRRRMTMSVWEQRTSQLRRHRQMSSREILFSSPSEEQEAPPGCPQNLKAT
GSLKLAEPTASTAQPPKPMDLTLEEPPLSMGVLEPPLSVPLAEPPIPIDSPLPDPPMSTV
VSIPEPTESEPCPEGQLDVTDHCHPGLNGRRSPRLNGERRQRAVRKFRPPAGDTLTSDMA
GMRLRRPRGTGHHEAQVGARGLDSPQGEGSSRSVSRERKTPEERQDKERRACNTGETSQP
SETREAEHRQGDPNQAAGPELPNREEGPQSERFQAAVPELPEGQTGDNDTGNNATTLNQD
KSPLSSSIYIEVTNVQSSLELTPITGNSKDMEASKPEKEEEQLTSPANIVTPDSMFIFKP
GNPIRRACHYVVNLRYFETCILLVIAASSIALAAEDPVSATSNWNKVLRYFDYVFTGVFT
FEMIIKMIDQGLILHDGSYFRDLWNILDFIVVVGALVAFALTNNKGRDIKTIKSLRVLRV
LRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDGS
KDTEKDCQGFYIDYEKDKKEVKRRDWRRHDFHYDNIVWALLTLFTVSTGEGWPQVLQHSV
DVTEEDRGPSRGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKN
ERACIDFAISAKPLTRYMPQNRQTFQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSA
PPAYEAVLKHLNTAFTVLFSVECVLKIMAFGFLNYFRDTWNIFDFITVLGSITEIVVDLQ
SIETFNMGFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIG
MQVFGNIRLDEETHINQHNNFKTFFGALMLLFRSATGESWQEIMLSCLGGQKCEPDPLAL
TSDHEERCGTEFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVR
IWGEYDRAACGRIHYTDMYEMLTLMSPPLGLGKKCPSKVAYKRLVLMNMPVDEEMSVHFT
STLMALIRTALEVKIARGGEDRGQMDSDLQKEISVIWSHLSQKTLDLLVPIHKASHMTIG
KIYAAMMIMDYYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPQEILCSAKALPFLPHSPG
SALTRGGFVALSPISPQEMFMQPMSQDLEDKGEDYHNYHHHHLLHHQLHTLVPERKEFNR
NLCPTNRQDAPLRVPGRAVSIRASSMPRLAVDTQVGTDSSKSMKRSFSTIGDQCVNGLWQ
EEYSLKRVSPDRLNRPRQRSIRGIRCNLREPVDHERGRSKERRHLLSPDVSRCNSEERSQ
DPSQERKQSRSPSEGRTHALHRQGNTSGTPDLSSTPRGRRQLPQTPLRPRPHISYSPLVC
RAHLSPPAASEGRARTQEAPGEMEDPSLREEGERLAPESGAGVGVVIGVGGPGLGVSHPH
PSPHRYISEPYLILHEELHSPDSSGLDETLTFEAAIATSLGRANTISSAPQLRHNWQVPN
GHFHKRLGQASSVVACELLSDTDEDDRC
NT seq
7467 nt
NT seq
+upstream
nt +downstream
nt
atgttggaattgggctcctgttcagtcagtgctcagaccctggcggaccacaatgccctg
ggggtgccccatctggccagggggagcgtctgtgggagcagcaacccacgccaatacgac
ctccaccccgagtcagagaactggcgcaagcaccgtctgggcctggccgagggttcccac
tcctgctccctgctggaaccccagagcctgtcagacagcctgctttcccacacagccagc
ttcaacaccctctacctcccacacaatgctcataccccccatggcctctctctggatgtg
ggcagctcctacgacagggctggggaagcgctggtgatggacccggaccgacccgtcagc
cccatcgtcattaaaaggcgccgggggggtctcatcgagcagcgggacattgttaaagcc
caccaagctcacaagattcagagcaccccacaggccctgcgcaaagaatgggaaatggcc
cggttcggagacgacgtccccggcttgttgggctctggggatgggggctctgagcgcaac
aggacccgggagggaccggctctgtctacaggtggtggagtgtccccagccttcaaacag
accaaggcgcagagagcccgcaccatggcactgtacaaccccatccctgtcagacagaac
tgtttcaccgtaaatagatcactcttcattttcggagaggacaacattgttcggaagtac
gctaagaaggtcattgagtggcctccgtttgagtacatgatcttagccaccatcatcgcc
aactgtatcgtactggctttggagcagcacctgcctggagaggacaagactcccatgtcc
aagagactggaaaagacagagccttacttcattgggatgttctgctttgaagctgggatt
aaggttgtggcgttgggatttgtactccataaaggctcctacttgaggaacggctggaac
gtcatggacttcattgtggttctgagtgggattctggccacagcgggagctcacatgaac
atcccagtggacctgcggaccctgcgggccgtacgcgtgctcagacccctcaaactggtc
tctggaatccccagcctgcagatagtcctgaagtccatcatgaaagccatggtgccgctg
ctccagattggcctgctgctcttcttcgccattctcatgtttgccatcatcggcctggag
ttctacagcggaaagctccacaacacctgtctgcccatgccaaatatcctggagaatgag
acggtggacaagtctgagtcagagttcccgtgtggggtgaggaagtgccctgacaagtac
gcctgcagtgaaacctggatcggccccaacgatggcatcacccagtttgataacatcttg
tttgctgtgctcaccgtcttccagtgcatcaccatggagggctggaccaccgtgctctac
aataccaacgatgccttaggccccacgtggaactgcatgtacttcatccctctgataatc
atcggctccttcttcgtgctgaacctggttttaggagttctctcaggggagtttgccaag
gagagggagcgggtggaaaaccgcagggcgttcatgaagctacggaggcaacagcaaatt
gagcgggaactcaatggctaccgagcatggatcgacagagcagaagaggtgatgcttgcg
gaggagaataagaatttaggaccttctgctcttgatgctcccaagaggctgtctgaatgg
aatacaggcggtaaccatgtgctgaagagggccaccatcaagaggagaggggtggatgcc
gtccatcggggcccagaggaagagcagtacggtgacatctcttctgtgggcatcccgatg
accagagccagcatcaggagtgctaagagaggacccacagcttatttcaagcggaaggag
cgtctgctgcgtatctctatccgccgcatggtgaagacacacaccttctactggaccgta
ctgggcctggtggccctcaacacactctgtgtggccatcgtccatcacaaccagccccac
tggctgtctgtgttcctctactatgcagagtttctcttcctgggtctgtttctcactgaa
atgtgtttaaagatgtacagcctgggacccagactctacttccactccgccttcaaccgc
ttcgactgcggcgtgatagtgggcagcatctttgaggtgatgtgggggttcttcaggcct
gacatgtcctttggcatcagtgtgctgcgcgctctccgtctgctgaggatattcaagatc
accaagtactgggcgtcgctgaggaacctggtggtatccctgatgaattctatgaagtcc
atcatcagcctcatcttcctcctcttcctcttcatcctggtctttgctctgctgggcatg
cagctattcggtggcaggttcatctttgaagactacactcctacaaactttgacacattt
cctgctgccatcatgactgtctttcagatcctgacaggagaagactggaatgaggtgatg
tacaatgggatccgctcccagggaggagtgaagtcaggaatgtggtcctccatatacttc
attgtgctcacactctttggtaactacacactgctgaatgtcttcttggccattgctgtg
gacaatctggctaatgcccaggaactaaccaaggacgaagaggacgaagaggctgctttc
aatcagaaacatgctctccaaaaagccaaggaagttggggccatgtcttccctgatgtca
tcacacaggaggaggagaccctacctgtacaggaaaagagcgatacacaggagcaggcct
gcctactctctggaggaggctgagagcctcgccgaggggcccccctgcccgccattgaat
tcctctaactctttcatgtccaggggagagaggagaagacggatgaccatgtctgtgtgg
gagcagagaaccagccaactgcgcaggcaccggcagatgtccagccgagagatcctcttc
agcagccccagtgaggagcaggaagcgccccctggatgcccccaaaacctcaaagccaca
ggcagcctgaagctggctgaacctacggcctccacagctcagccccccaagcccatggac
ctaactctagaggagccacccctgtccatgggggtccttgagccccccttgtccgtccct
ttagcagagccacccatacccatcgacagtcccctgcctgacccccccatgtccacagtt
gtgtccattccggagcccactgaatctgagccgtgcccagagggccagcttgatgtcacc
gaccactgtcacccaggtctcaatggccgcagaagccccaggttaaatggggagagaagg
cagagagcggtgcgtaagttccgccctcctgctggtgacaccctgacctctgacatggca
gggatgaggctcaggaggccaaggggcacagggcaccacgaagcccaggttggggctaga
ggcctggactcaccccagggggaggggagcagtcgctctgtcagcagggagaggaagacc
ccagaggaacgacaggacaaggagaggagagcctgtaacacgggagagaccagccaacct
tctgagaccagggaagctgaacacagacagggtgaccctaaccaggctgcgggtcctgag
ctgccgaacagggaggagggtccacagtcagaacgatttcaggctgcagtaccggagctc
ccagagggccagacaggagacaatgatactggtaacaacgccaccactctgaaccaggat
aagtcccctctgagctccagtatctacatagaggtgaccaatgttcagtcttcactagag
ctcacccccatcacaggtaatagtaaagacatggaggcgtccaagcctgagaaggaagag
gagcagttgaccagcccagccaatattgtcacgcctgacagcatgttcatcttcaaacct
ggcaacccgatccgccgggcctgtcactatgtggtgaacctgcgttactttgagacatgc
atcctgctggtgatcgctgccagcagtatcgccctggctgcagaggaccccgtgtcagcc
acctctaactggaacaaagttttgcgctactttgactacgtgttcacaggtgtctttaca
tttgaaatgataataaagatgatagaccagggcttgattctccatgacggctcctatttc
cgggacctgtggaacattctcgactttatcgtggtggtcggagctctggtagccttcgcc
ctcacaaataataaaggacgggacatcaaaaccatcaagtctcttcgggtcctgcgtgtc
ctgaggcccctgaagaccatcaagagactaccgaaactcaaggcagtgtttgactgtgtg
gtgacctctctgaagaacgtcttcaacatcctcatcgtctacaagctcttcatgttcatc
ttcgctgtcatcgctgtgcagctgttcaaagggaagttcttctactgcacagacggatcc
aaagacacagagaaggactgccaaggcttctacattgactatgagaaggataagaaggaa
gtgaagaggagggattggaggagacatgacttccactatgacaacatagtctgggcccta
ctcactctgtttactgtctccactggggagggctggccacaggtcctgcagcactctgtg
gacgtgacagaggaggacagaggtcccagccggggcaacaggatggagatgtccatattc
tatgtcatctactttgtggtcttccccttcttcttcgtcaacatctttgtggctctcatc
atcatcaccttccaggagcagggagacaagatgatggaggaatgcagcttggagaagaac
gagagggcttgcattgactttgccataagtgccaaacccctgacccgctacatgcctcag
aacagacagacgttccagtaccgtctctggcactttgtggtctccccctccttcgaatat
actgtgctggccatgattgcactcaacaccattgtcctgatgatgaagtattactctgcc
ccaccagcatacgaggctgtgctgaaacacctgaacacagctttcactgtgctcttctct
gtggagtgtgtcctcaagatcatggcctttggctttctgaactactttcgagacacttgg
aatatattcgacttcatcacagttttgggaagcatcacagaaatagtggtagacttgcag
tcaattgagaccttcaacatgggcttcctgaagctgttccgtgcagccagactgatcaag
ctgttgaggcagggttacaccatccgcatcctgctctggacctttgtccagtcctttaag
gctctcccctacgtttgtctgctcattgccatgctctttttcatatatgcaatcatcgga
atgcaggtttttggaaacatcagactggatgaggagactcacatcaaccaacacaacaac
ttcaagaccttttttggtgctctgatgttgctattcaggagtgccacgggggagtcgtgg
caggagatcatgctgtcatgtttaggggggcagaagtgtgagccagaccccttagctcta
acgtcagaccatgaggagcgctgtggaactgagtttgcctacttctactttgtctccttc
atcttcttcagctcatttctaatgctgaatctgtttgtggctgtaatcatggacaacttt
gagtacctcacccgggattcctcgatattggggcctcaccacctggatgaatttgttcgt
atctggggtgaatatgaccgagctgcttgcgggcgtattcattacactgacatgtatgaa
atgctgaccctcatgtcgccacctctaggcctcggcaagaaatgtccatccaaagtggct
tataagaggctggtgctgatgaacatgcctgtggatgaagagatgtcggttcacttcacc
tccacccttatggccctgatccgaaccgccctcgaggtgaaaatagccagaggaggggag
gaccgaggtcagatggattcagatctacagaaggagataagtgtcatttggtcacacctt
tcacagaagaccctggacctgctcgtccccatccacaaagccagtcatatgaccattggg
aagatctatgcagccatgatgatcatggactactacaagcagagcaaagccaagaagctc
aggcaacagctggaggagcagaaacacgctcccatgttccagcgtatggacgcttcctct
ctgcctcaagaaatcctctgcagtgccaaagccctccctttcctgccccacagccctgga
tctgccctgaccagaggaggatttgtggccttgagtcccatatcccctcaggagatgttc
atgcagcccatgtcccaggacctagaggacaaaggggaggactaccacaactatcaccac
caccacctgctccaccaccagctccacacactggttccggagcgcaaagagtttaaccgc
aacctttgccccactaacaggcaggatgccccactcagggtgcccgggcgggcagtctct
atccgagcctcctctatgcctcggctggctgtagacacacaggtggggacagacagcagc
aaatcaatgaagcgctccttctccactattggggatcaatgtgtgaatggcctgtggcag
gaggagtactctctgaagagggtcagtcctgaccgtctgaacagaccacgacagaggagc
atcagaggaatcaggtgcaacctcagggaaccagtggatcatgagcgggggcgctccaaa
gagaggcgccacctgctgtctcccgacgtgtcccgctgcaactctgaggagcggagccag
gacccgtcacaggaacgcaagcagtcccgttcccccagtgaaggacgcacacatgccctc
cacagacagggcaacacttcaggcaccccagacctgtccagcacaccccgcggccggcgc
cagctcccccagacgcccttgcggccacgccctcacatctcctactcccccctggtgtgc
cgagcccacctctccccccctgctgccagtgagggcagagcccggacccaggaggccccc
ggagagatggaggatccctcattgagagaggagggggagaggctagccccagagtcagga
gcgggggtgggggtggtaataggggtgggtggcccagggttaggggtcagtcacccgcac
ccctcacctcaccggtacatctcggagccgtacctgatcctgcacgaggagctacacagc
ccagactcctcaggcctggatgagactctgaccttcgaggcggccattgcaaccagtctg
ggcagggccaacaccatcagctctgccccccagctcagacacaactggcaggtccccaac
ggacacttccataaacgcctgggtcaggccagctctgtggttgcctgcgagctcttgagt
gataccgacgaggatgaccgctgttag
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integrated database retrieval system
