Salvelinus fontinalis (brook trout): 129810590
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Entry
129810590 CDS
T11136
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129810590 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129810590 (cstf3)
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129810590 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_19
TPR_6
TPR_16
Motif
Other DBs
NCBI-GeneID:
129810590
NCBI-ProteinID:
XP_055717285
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Position
1:7131001..7171655
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AA seq
716 aa
AA seq
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MSTEATADQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAVQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAAQY
LDQSSKLLAEKGDMNNSKVFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRLKHEKVH
SIYNRLLAIEDIDPTLVYIQYMKFGRRAEGIKSGRIIFKKAREDMRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEK
SGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAALLQTETVVTPSAPTQKDEADRKPEYPKPDTSQMIPYQPRHMAPP
GLHPVPGGVFPVPPAAVILMKLLPPPTCFVGPFVQVDELMESFRRCTLPETVDAAVELIT
GRQPDAGGEGNGSMENHAMTKSLKRPNADSDEEEDKGAVAPPVHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggaagcaaccgccgaccaggcagctgagtatatcccagagaaggttaagaaa
gcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgattcga
gaagcacagaaccaaccaatagacaaagcaaggaagacgtatgaacgacttgtggcccag
ttcccaagctcgggcagattctggaaactattcattgaagcggagatcaaggcaaaaaac
tatgacaaggtagaaaagttgtttcagagatgtctgatgaaagtgctgcacatcgacctg
tggaaatgctacctctcctacgtccgagagaccaaaggaaagctacccagctacaaagag
aagatggcgcaggcatatgactttgcgctggataaaatcggcatggagatcatgtcctac
cagatatgggtggactacatcaacttcctcaaaggagttgaggcggttggttcgtacgct
gaaaaccagcgaatcacggcggtgcgcagggtctaccagaggggctgtgtgaaccccatg
atcaacatcgagcagctctggagagactacagcaagtatgaggagggcatcaacgtacat
ctggccaagaagatgattgaggaccgcagcagagactacatgaacgctaggagagtggcc
aaggaatatgagactgtgatgaagggtctagataggaacgccccctcggtgcccccccag
aactccccccaggaggcggtgcaggtggagatgtggaagaagtacatccaatgggagaag
agcaacccgctccgcacagaggaccagacactcatcactaagagagtgatgtttgcctat
gagcagtgtctgttggtgctgggtcatcaccctgacgtgtggtatgaggctgcccagtat
ctggaccagtccagtaaactactggcagagaagggggacatgaacaactctaaggtgttc
agtgacgaagcagctaacatctacgagcgcgccatcggtactctattgaagaagaacatg
ctgctgtacttttcattcgctgactacgaggagagtcgattgaagcatgaaaaggtccac
agcatctacaaccgtctgctggccatcgaggacatcgaccccacgctggtctacatccag
tacatgaagtttggcaggcgggccgagggcatcaagtcaggccgcatcatctttaagaag
gcccgggaggacatgcgcacgcgtcaccacgtctacgtgactgcagcactgatggagtac
tactgcagtaaggacaaatcagtggccttcaagatatttgaactgggcttgaagaaatat
ggagacattccagagtatatacttgcatacatcgattacctctcacaccttaatgaggac
aacaacaccagagttctgtttgagcgtgttctcacctcgggaagcctgtcgccagagaag
tctggtgagatctgggcacgtttcttggcctttgagagtaacatcggggacctggccagt
atcctgaaggtggagcgcaggcgtttcacagccttcaaggacgagtacgaaggcaaggag
acagccctgctggtggacagatacaagttcatggacctgtacccctgctctgccagcgag
ctcaaagctctcggatacaaggacgtgtctcgtgccaaactggcggcgttgctccagaca
gagacggtggtgactccatcagctcccacgcaaaaggacgaggccgaccgcaaaccagag
taccccaaacctgacaccagccagatgatcccctaccaaccacgacacatggcccctcca
ggactgcaccctgttccagggggggtgttcccggtccccccggccgcagtcatcctgatg
aagctactgcctccacccacctgcttcgtggggccctttgtgcaggtggatgaactgatg
gagagcttcaggagatgtacactaccagagactgtagatgcagcagtagagttgataacg
ggcaggcagcctgatgccggcggagaagggaacggctccatggagaaccatgccatgacc
aagtcactgaagagacccaacgcagactctgatgaagaggaggacaagggcgctgtggcc
ccacccgttcacgacatctaccgcgctcgccagcagaagaggattcggtga
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integrated database retrieval system
