Salvelinus fontinalis (brook trout): 129810606
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Entry
129810606 CDS
T11136
Symbol
gpc1a
Name
(RefSeq) glypican-1
KO
K08107
glypican 1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sfon00535
]
129810606 (gpc1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sfon00537
]
129810606 (gpc1a)
Proteoglycans [BR:
sfon00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
129810606 (gpc1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sfon00537
]
Others
129810606 (gpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
PRAI
Motif
Other DBs
NCBI-GeneID:
129810606
NCBI-ProteinID:
XP_055717266
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Position
14:complement(30744213..30797611)
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AA seq
553 aa
AA seq
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MDFLQALLFFFLSAVPLSADNANSKARSCLDVRQFYSGKGFTLNGVPQTEISGEHLRICP
QGYTCCTSAMEETLSNLSRREFEGLVREAGRSLQASLNTQYRSFDTYFTDLLNRSERSLQ
ESFLATLGSLYSKNAPVFQDLYADLRRYYRGSAVNLEETLNDFWARLLERLFKASSLLQY
TLTDDYLECVAKQTETLRPFGDVPRDLKPKVTRAFVAARSFVQGLTVSGEVVRKVSQVPL
SPECTRAMMKLVYCPHCRGLASVKPCANYCRNVMKGCLANQADLDTEWQNLIDTMLQVAS
SFSADPSVDVVIYSLPIRISEAILYMQENTEVFTSKVFQACGTPRVADTQSSGSEERKKR
VNPASTAMEYKPSPTVGVPLEMQISDVSSKLREMQQYWVQLPAALCNSKVAAGAAGDKCW
NGMTKARYLPEVMGDGLASQINNPEVEIDITKPDMTIRQQIMQLKIMTNRLRNALNGNDV
DFQDASDDISGSGSGMCTGESCARSGPRVIVPKTDSTRYYNPPENKKVKGTGTQTHPSIL
LPLLSLATLLLRR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctacaggctcttctattcttttttctatccgctgtcccgttgtcggcggac
aatgcgaacagtaaagcccggagctgtttggatgtccgacagttctacagcgggaaaggc
ttcaccctcaacggggtgccacagacagagatatctggtgagcacctgcggatctgtccc
caggggtacacctgctgtaccagtgccatggaggaaactctgtccaacctgagtcgcagg
gagtttgaggggctggtcagagaggcaggacgctcgctacaggcctccctcaacacacag
tacaggagcttcgacacgtacttcacagacctcttgaacagatccgagcgttcccttcaa
gagtccttcctggccacgctgggctctctctactccaagaacgctcctgtgttccaggac
ctgtacgctgacctgcgtcgctactaccgtggctccgctgtcaacctggaggagacgctc
aacgacttctgggcacggctgctggagcgcctgttcaaggcctcctccctcctgcagtac
accctcactgacgactacctggagtgtgtggccaagcaaactgagaccctgcggcccttt
ggggacgtcccccgtgacctcaagcccaaggtcaccagggccttcgtggcggcgcggtca
ttcgtccagggcttgactgtcagtggggaggtggtccgcaaagtctcccaggttcctctg
agcccagagtgtacccgtgctatgatgaagcttgtgtactgcccccactgtagaggcctg
gcctccgtcaagccctgtgccaactactgcagaaacgtcatgaagggctgccttgccaac
caggccgacctggacaccgagtggcagaacctcatcgacaccatgctgcaggtggcgtct
agtttcagtgctgaccccagtgtggacgtggtaatctactccctccccatccgcatctca
gaggccatactctacatgcaggagaacacagaggtcttcaccagcaaggtgttccaggcc
tgtgggacccccagggtggcagacacacagagctcagggtcggaggagagaaagaagaga
gtgaaccctgccagcaccgcaatggagtacaaacccagccccaccgtaggggttccactg
gagatgcagatatctgatgtgtccagtaagctgagggagatgcagcagtactgggtccag
ctgccagctgctctgtgcaatagtaaagtggcagcaggagcagctggtgacaagtgctgg
aatggcatgaccaaggccaggtatcttcctgaggtgatgggtgacggcctggccagccag
atcaataacccagaggtggaaatcgacatcaccaagccagacatgactatccgccagcaa
atcatgcagctgaagatcatgaccaaccgactgaggaacgccctcaacggcaacgacgtg
gacttccaggatgccagtgatgacatcagcggttcaggaagtggaatgtgtacaggcgag
tcatgtgctcgaagcggacctcgtgtcattgtgcccaaaacagacagcaccagatactac
aatcctcctgagaacaagaaggtgaagggcacaggaacccagacccacccctctatcctc
ctccccctgctctcattggccacactgctgctcaggcgataa
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