Salvelinus fontinalis (brook trout): 129810723
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Entry
129810723 CDS
T11136
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129810723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129810723
Spliceosome [BR:
sfon03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129810723
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
GIP4
Wap1
Motif
Other DBs
NCBI-GeneID:
129810723
NCBI-ProteinID:
XP_055717488
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All DBs
Position
14:complement(34692441..34696420)
Genome browser
AA seq
309 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMALKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELQHVDEFIDELLHSERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSDEEDEEEEKPERVQTPEPHRRSYRDNDRPRRSPSPRYRRSRSPRRR
SRSPKRRSTSPRRERHRSKSPRRHRSRSRERRHRSKSPGHHRSHRHRSRSKSPERSSKKS
HKKSRRGNE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataggactgttaaagatgcaaacagtatacatggaacaaatccacaatacttg
gtagagaaaattattcgtactcgaatttatgaatcaaaatattggaaagaagaatgcttt
ggtctgactgccgaacttgtcgttgacaaagccatggcgttgaagtttgtcggaggagtc
tatggaggaaatatcaaacctacaccgtttctgtgtctcactctgaagatgctacagatt
cagccagaaaaagacatcattgtagaattcatcaagaacgaggatttcaagtatgtccgc
ttgctaggagcaatgtacatgaggttgactgggacatcagtggattgctacaaatacctg
gaaccactgtacaacgactaccgaaaaatcaagagccagaacagaaatggagagtttgag
ctgcaacatgtagatgagttcattgatgaactgctacactctgagagaatgtgtgacatc
atccttcccaggcttcagaaaaggcaggtccttgaggaggcagagttgttagacacacgc
atcagcgccctagaagaggacctagatgaagtggagaccagtgatgaggaagacgaggaa
gaggagaagccagagagagttcagaccccggagccccacagacggagttaccgggacaac
gaccgccctcgccgttcgccctctccacgctacagacgcagccgttcacccagacggagg
agcagatcacccaagagacgaagcacatcccccagacgagagcgccaccgtagcaaaagt
ccccgtcgccaccgcagccgctcccgagagagacgtcaccgctcaaagtccccaggccat
cacagaagccacaggcatcgcagtcgctccaaatccccagagaggagttcaaaaaagagc
cacaagaagagtcgaagagggaacgagtga
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