Salvelinus fontinalis (brook trout): 129810803
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Entry
129810803 CDS
T11136
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129810803
Membrane trafficking [BR:
sfon04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
129810803
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
129810803
NCBI-ProteinID:
XP_055717678
LinkDB
All DBs
Position
2:complement(6035163..6184535)
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AA seq
1429 aa
AA seq
DB search
MYFLTGWPRRLLCPLKSEEEPFHVQPSSQRFYFAVLSETQLSVWFSRPSVLIVSYIESAK
ASSQFGFYQQAEWKQDDSMIAVAAANGYILLFDVVGGGEDKYLYEPVYSKGSSGVKVTPG
YKEEQCAPALSLEMKRPLDLEAPITSMQSLQEDLLVSTADGYLHILHWDGVSNGRKAISL
CSVPFSLDLQSARGGLCLDLKGVYIRDMTYCVTLDGFAVVLDDGRLGFITPLANRITADQ
LQGVWAADVTDGTCVAVNNKYRLVTFGCASGSVLVYSIDTTTGSMQLSHKLELTPKHYPD
VWNKTGAVKLIRWSPDYSVAMVTWECGGLSLWSVFGAHLICTLGEDFAYRSDGTKKKPIN
ISSMCWGAEGYQLWVITSREETELVENMEEAPPQTQQAGILQFHFIKSALTVNPCTSNQE
QVLLHGEDRLYLTCGDPTQLPSSSSESPHPHNLPHGGEGSPPHHPSPNSTSQGLSTLLGY
KHWHVVQIHSTYLESNWPIRFAAIDTAGQCIAVAGRRGFAHYSMSTRKWKLFGNITQEQN
MTVTGGLVWWNGFVVVACYNFIDRQEELRLYLRSSNLDNTFSSVTKLHSGTLLLNVFRDM
IILFRADCSICLYSMERRHDGPNPSASVELLQEVSMSRYIPHPALVVSVTLTSVRTETGI
TLKAPQQACMADSIILNLAGQLIMLQRDRSGPQIQEKLPFCPPVVLAQYVENVWTTCRSN
RKKRHLLEALWLSCGEAGMKVWLPLFPRDHRKPHSFLSRRIMLPFHINIYPLAVLFEDAL
VLGASNETVLYDSLQGPREGRESLEGLFPYCTVERTSQIYLHHILRQLLVRNLGEQALLL
AQSCAALPYFPHVMELMVHVVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTIVHCARK
TEFALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLFNTAL
EQGKWDLCRHMIRFLKAIGSGEMETPPPTPTTQEPSSTGGFELFRNRSISLSQSADSIAA
GKFNLQKTFSMPSGPSVKGSDRWSKDSDCAENMYIDMMLRRHARHLLEHVRLKELGCFSA
QLGFELIGWLCHERTRVARVDDFVMALKCLHKDFLWPFPVIPAGSMSSPFKNGHRRTVLS
QHLLKSQSADSLLNSDMDTAPPQAAARNSNHTWLDGLGALGPTEPTEMDTALSHGGPQTQ
EAFLSPLTNKTEECSIDSATDLTETSSMVDGDWTMVDENFSTLSLTHSELEHISMELANK
GPHKSQVQLRYLLHVFMEAGCLEWCVVIGLILREAAVIKQVVNFLDSPEVPPETVQSVRS
GLLGVDAWASTDCLGYKPFLNMIRPQLQKLIETSVEQIQPEAFLPGASNSKLAEPQPGGP
SAEDSRGPALLGLALPLEPPGGLGTEDGRVPEEQEEQEVDEGVYDCTLS
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgtattttttaactggctggcctcggaggctactttgtccactgaaaagtgaagaagaa
ccgtttcatgttcaacccagctcccagaggttttacttcgctgtattgtccgagactcaa
ctaagcgtctggtttagtcggcccagtgttctgatagtgagctacatagagtcggcgaaa
gcatcatcccagtttggcttctatcagcaggccgaatggaagcaggacgattccatgata
gcagtagcggctgccaatggttacatcctcctgtttgacgtggtgggaggaggagaggac
aagtatctttatgaacccgtctattccaaagggagtagtggtgttaaggtcaccccaggt
tataaagaggagcagtgtgcccccgctctcagcctggagatgaagagacccttagatctg
gaggctcccatcaccagcatgcagtctcttcaggaggatctgttggtgtctactgctgat
ggctacctccacatcctccactgggatggagtcagcaacggcaggaaggccatcagtctc
tgtagcgtccctttctccctggacctacagtctgccagaggtggtctgtgtctggacctg
aagggggtgtacatcagagacatgacttactgtgtgactctggatggctttgctgtggtg
ctggatgatggcaggctggggttcatcactcctctagccaacaggatcactgcagaccag
ctgcagggcgtctgggcagcagatgtaacagacggcacgtgtgtggctgtcaacaataag
taccgactggtgacctttggctgtgccagtggctcagtgttggtgtacagtatcgacacc
actacagggtccatgcagctctcccacaagctggagctcactcctaaacactaccccgac
gtgtggaacaagacgggtgcggtgaagctgatccgctggtcccctgactacagtgttgcc
atggtgacctgggagtgcgggggactgtctctgtggagtgtgttcggagcccacctcatc
tgtaccctgggggaggactttgcgtatcggtcagacggcactaaaaagaaacctataaat
atcagctcaatgtgctggggagcggagggctaccagctgtgggtcatcaccagcagagag
gagacggagctagtagagaacatggaggaggctcctccccagacccagcaggctggcata
ctgcagttccacttcatcaagagcgccctcacggtcaacccttgcacgagtaaccaggag
caggtgttacttcacggggaggaccgtctctacctaacctgtggtgaccccacccagctc
ccctctagcagctcagagagcccccacccccataacctcccccacggcggggagggcagc
cccccccaccacccatcgcccaactctacctctcagggactcagcactttactgggatac
aagcactggcacgtggtccagattcacagtacatacctagagagcaactggcctatacgg
tttgcagccatagacacagcaggccagtgtatagctgtagcagggagacgtggatttgca
cattactccatgtccaccaggaaatggaagctgtttgggaacatcactcaggagcagaac
atgaccgtgacagggggactggtctggtggaacggctttgttgttgttgcctgttacaat
ttcatcgaccggcaagaagagctgcgtctgtacctgcggtcatctaacctggataacacc
ttctcctccgtcaccaagctgcactctggcactctgctgctcaacgtgttcagagacatg
atcatcctcttcagagcagactgctccatctgcctctacagcatggagaggagacacgac
gggcccaatccatcagccagtgttgagctgcttcaggaggtgtccatgtctcgctacatt
cctcatcctgccctggtggtgtcggtcaccctcacctccgtacgcacagagaccggcatc
acgctcaaagccccacagcaggcctgtatggcagacagcatcatcctgaacctggcaggc
cagctcatcatgcttcagagagaccgttctggaccccagatacaggagaagctgccgttc
tgtcctccagtggttctggctcagtatgtagagaatgtgtggacgacgtgtcgcagtaac
aggaagaagcgccacctactggaggctctgtggctgtcgtgtggagaggctgggatgaag
gtgtggctccccttgttcccccgtgaccatcgtaagccccactccttcctgtcccgccgc
atcatgctccccttccacatcaacatctaccccctggctgtgctgtttgaggatgctctg
gttctgggagcttccaacgagacggtgctctatgacagcctgcagggtcccagagagggc
cgggagtccctagaggggttgttcccctactgcacggtggagaggacttcccagatctac
ctccaccacatcctgaggcaactcctggtccgtaacctgggggagcaggcccttctcctg
gcccaatcctgtgcagcgctcccctacttcccccacgtcatggagctcatggttcacgtg
gtgctggaggaggaggccacctcccgggagcccatccctgacccgctgctgcccaccgtg
gccaagttcatcaccgagttccccctgttcctccagaccatcgtgcactgcgccaggaag
acagagtttgccctgtggaactacctgtttgctgctgtgggcaaccccaaggatctgttt
gaggaatgtctgatggctcaggacctggacaccgctgcatcctatctcattatactacag
aacatggaggttccagcggtgagcaggcaacacgctacgctactcttcaacacggctctg
gagcagggcaagtgggacctctgtcgtcacatgatccgattcctcaaggccattggctct
ggggagatggagaccccacccccaacaccaaccactcaggaacccagttcgacaggaggt
tttgagttattcaggaatcgcagcatcagtctgtctcagtcagctgacagcatcgctgct
gggaagtttaacctacagaagacctttagcatgccttctgggccctctgttaaggggtct
gacaggtggtctaaggacagtgactgtgcagagaacatgtacatagacatgatgttgagg
cgtcacgcccgccacctccttgagcacgtcagactaaaagagttgggttgtttctctgcc
cagctgggcttcgagctgattggctggctgtgccacgagcgcacgcgggtggcgcgggtt
gatgactttgtcatggcgctgaagtgtctccacaaggacttcctgtggccgtttcctgtc
atcccagccggctccatgagctcgcctttcaagaacggacaccgcaggacagtgctgagc
cagcatctactgaagtcccagtcagcagacagcctgttgaacagtgacatggacacagcg
cccccgcaggccgcagcacgcaacagcaaccacacctggctagacgggctgggggctctt
ggacctacagagcctacagagatggacactgccttgtcccacggggggccacagacacag
gaggccttcctctctccactaaccaacaaaacggaggagtgcagtatcgactctgccaca
gacctgacagagaccagcagcatggtggatggagactggaccatggtggatgaaaacttc
tctactctcagtctgacccactctgagctggaacacatctccatggagctggctaacaag
ggaccacacaagtcccaggtccagctacggtacctcctgcatgtgttcatggaggctggc
tgtctggagtggtgtgttgtgattggtctgatcctgagagaggccgcagtcatcaagcag
gtggtcaacttcctggacagccccgaggttcctcctgagacagtccagagtgtccgctcc
ggcctgctaggggtcgacgcatgggcctccacagactgcctgggctataagcccttcctg
aacatgatccggccccagctacagaagctcatagagacttctgtagagcagatccagcct
gaagccttcctgccaggggcttccaactcgaagctggctgagccccagcccggaggcccc
agtgcggaagacagtagggggcctgctctcctgggtctggcccttcctttggagccccct
ggggggttagggacagaggacggcagagttccagaggagcaggaggaacaggaagtggac
gagggggtgtacgactgcactctgtcctga
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