Salvelinus fontinalis (brook trout): 129810974
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Entry
129810974 CDS
T11136
Symbol
nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
129810974 (nwd1)
Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
129810974 (nwd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
WD40
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
NACHT
WHD_NWD1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
DUF4062
AAA_16
Beta-prop_IFT122_1st
Beta-prop_VPS8
NBCH_WD40
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Beta-prop_ACSF4
Beta-prop_CAF1B_HIR1
Beta-prop_Nup120_160
NPHP3_N
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
Beta-prop_DCAF4
AAA_22
Beta-prop_Aladin
Beta-prop_SPT8
NPHP3
Beta-prop_Vps41
Nucleoporin_N
PROPPIN
AAA_25
Beta-prop_IFT140_1st
AAA
Beta-prop_IP5PC_F
ATPase_2
Beta-prop_SCAP
Viral_helicase1
RuvB_N
AAA_30
AAA_11
AAA_18
AAA_33
nSTAND3
AAA_14
Beta-prop_WDR19_2nd
NTPase_1
RNA_helicase
AAA_28
cobW
AAA_17
Motif
Other DBs
NCBI-GeneID:
129810974
NCBI-ProteinID:
XP_055717998
LinkDB
All DBs
Position
14:complement(45362146..45378687)
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AA seq
1659 aa
AA seq
DB search
MASPRGALMEVLRGQSTEGLKLRSNVVRVFVSSTFTDMSSERNALLDKTYPELQAFCQSQ
GLVFEVVDMRWGLQDAIAVDHMTTELCLQEIEACKKVSVGPSFIALLGNRYGHRPIPRVL
PGKQFEVLLSKLPQDQVGLLHQWFRKDNNAVPPVYVLQPITTLLPHYNDLQPERRPLQDD
SVISWRYTEARLLQLLRTAAVQAEENGDITVEQKHQFFKSVAEHEIEEGLRMPDGDESEP
SAILFVRELPHLRKKDSPKRLAQYMDVTADGLLDTEAQDLLSGLKSRLFAASPGILNLHS
VELCKGAIEPSCKEHAQYLESLCEQLVSQTKAHIARRVGSSVEAGTVMTNGARGGDISQR
KGEEDRGWLLQELSHHMALSAGKCSSVFRGREGLLGKICLAMWEHTNTRHAPLVVHGPPG
VGKTTLLCKLAQEMRGLLDPRAVVVLRLLGTSAESSDLGRVLQSVCFQICSVFSLSTPTP
ITAHTREDLVRFFHGLLAEVSERGDTLLLILDSLDQLSSATQGQKLHWLPKDIPPNVHLV
VSTADTGSPVLANLRRTVEVPGNFFEVEPLSCDQGREIMDAYMREAQRSLTPEQCEVVLC
SFQLSGNPLHLKLLLDMARRWASYTPVTDLALSSSAQEVMSQLLQALEERHGKQLVGAAL
GYIISARGSLSEAELRDILSLDNNVLAEVYQYWLPPNHSLIRLPPLLWVRLRHDLGELLV
EGQANGVTVLDFHHKLLTETVRERYQRSEQQADRHRVLAEYFLGRWSQGRFKAVLLPPLT
TTLDADRKVPPQPLWFAEGVANVIKLQELPYHLLHAGLWEELRQEVIGSSEWLYCKTLTC
GVASVIEDLTLCTELMDCPETQLIRDTFILLKPTLDFLDGQMDPSLFYTEVLARLHSFAE
MYPSLIGRLCCQCHDWLSCCPDPILVPKCAFLQPPGGALKTTLAGFQKGVTALDICPERG
ILLAGSEDGKVIAWDLNDLEVIQTLVGHTAKVLSVRVIDSGDHCLSLAADGSLRKWSLLS
GRQLYCTQEAVSINSLPSTTHIHVSEERALVFTHSGGQVKVWHLNTTELLFQVKDTGVSI
ILGFLNGMVVSLSDGGLVTFSHPSAEDKTAQIHLEKSSHRLTLTATLTLQKHGRLLIASK
EGFLYQVSSTEQDRQSQWTLRQTVTELPVCATFLSASDDERILLAGCERTLVLFHRESDC
VQSFLDLHHEDTVLCACVSSDSRVVVSGSEDQTIRVWSITTGNLLDSFLGMDAPVTTLAL
YEGTVVSASSSAYYLKLWHLPSPNDPQQRPKGCIPAGCPQVALTKDGDTVYYVRNIGQKE
VITWNCHTGKKIHMCTLCSSTDTMAVSAEVCCLELAQHKKLLFCGLTTGTVLIYPLAFPK
ETLCIPPPETLPTVRCMAIGGQEKHMAVAYEDSVCLFEITARDSFPSVEGPAAKFALSLL
HSPVSSMALLPDCRLLYGTACGEVTMYDFKSTSTATLDGHRSRVNCVTTSNWGTHALVGS
EDAVQRLWGLTPLVLDHTMEYKGFLFEGVLCAAFSESDKHVFTGSQDRTIKVWDVASGSL
LFVQYVYAPVTKMLTYRNGFVAISQLGYVIKEGFRCPDDVCPEYNPLRNINAHYRVTSRQ
KSADSPHSVITKIPEYNPAQFNFMALMLKSKPSHSCQLL
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgccaagaggagcactcatggaggtgctcagaggccagtcaactgaaggactg
aagctcaggtccaacgtggtccgagtctttgtcagctccacatttacagatatgagcagt
gaaaggaatgccttattggacaaaacctatcctgaacttcaagctttttgtcagagtcag
ggcttagtgtttgaggttgtggatatgagatggggtctccaggatgcaattgctgtggac
cacatgaccacagaactgtgtcttcaggaaatcgaggcttgcaagaaagtatccgtagga
ccaagtttcattgctctgctggggaaccggtatggtcaccgccctatcccccgtgtcctc
ccaggaaaacaatttgaggtgctgctgtccaagctaccacaggaccaagtggggcttctc
caccaatggttcaggaaagacaacaatgctgttcctcccgtctacgttcttcagccaatc
acaactctgttgccccactacaatgaccttcagcctgagagaaggccgctgcaggatgac
agtgtcatttcctggcgctacacagaggctcgattattgcagcttctacgcactgcggcc
gtgcaggctgaagaaaacggggatataactgttgaacaaaaacaccagttcttcaaatct
gtggcggagcatgagatagaggagggtctgcgaatgccagatggggacgagagcgagccc
tccgccatcctcttcgtgcgggagctacctcacttgcgtaagaaggacagcccgaagcgg
ctggcccagtacatggatgtgacggcggatggcctgctggataccgaggctcaggacctc
ctctcaggcctcaagtcgcgtctcttcgctgcctcgccgggcatcctcaacctgcacagt
gtggagttgtgcaagggagccatcgagcccagctgcaaggagcatgcccagtacctggag
agcctctgcgagcagctcgtgtcccagacgaaggcccacattgccaggagggttggttcg
tcagtggaggctggtacagtgatgacgaatggggcaagaggaggagatataagtcagagg
aagggggaagaggacagaggctggctgctccaggagcttagtcaccacatggctttgagt
gccgggaagtgttcgagcgtctttcgcggcagggaggggctccttgggaagatctgcctg
gccatgtgggaacacaccaacacccgccacgcgcccctggtggtgcatgggccaccgggt
gtgggcaagacaacgctgctctgcaagctggcacaggagatgcgtggcctcctggacccc
agggctgtggtggtgctcaggttgctggggacgtcggcagagagctccgacctgggccgt
gtcctccagagtgtctgtttccagatctgctctgtgttcagtttgtcgactcccacccca
ataacagcacacacgcgtgaggacctggtgaggtttttccatggccttctagctgaggtg
tcggagcgaggagacacacttcttctcatactagactccctggaccaattgtcctcggcc
acccagggccagaaactccactggctacccaaagacatcccccccaatgtccatttggtg
gtgtccaccgcagacacaggctctccagttttggctaaccttcggagaacagtcgaggtg
ccgggaaatttctttgaagtagaacccctatcatgtgaccagggtagagagatcatggat
gcctacatgagggaagcgcaacgaagcctgactccagaacagtgtgaagtggtactgtgt
agctttcagctgagtggaaatcctctgcatctgaagctactgctggacatggccaggcga
tgggcgtcctatacccccgtgactgaccttgccctgagcagtagtgcacaggaagtgatg
tcacagctactccaggcccttgaggagaggcatgggaagcaactggttggcgcagctttg
ggatatatcatctctgctaggggtagtctatcagaggcagagctgcgtgatatcttgtcc
cttgataacaatgtcctggctgaagtctaccagtactggcttccccccaaccactccctc
atccgcctcccccctctactgtgggtgcgcctcaggcacgacttgggagaactcctcgtg
gagggacaggccaatggcgtcacggtgctcgacttccaccacaagctgttgactgaaact
gtgcgagagaggtaccagaggtcagagcagcaggctgacagacacagggtccttgctgag
tacttcttgggtagatggagccaaggccgattcaaagctgtcctcctacctccactgacg
accacattggacgctgaccgcaaggtgccccctcagcccctgtggttcgctgaaggagtg
gcaaatgtcataaagctgcaggagctgccctaccacctcctccacgcaggcctctgggag
gagctgcgccaggaggtcattggcagtagtgagtggctgtactgtaagactctgacctgt
ggcgtggccagtgtcattgaggacctgaccctctgcaccgagctcatggactgccctgag
actcaactgatccgagacactttcattctcctcaagcccaccctggactttctagatgga
cagatggatccctccctcttctacacagaggtcttggccaggctccactccttcgctgag
atgtacccttcactgataggacgactctgctgccagtgtcacgactggctctcgtgctgt
cccgaccccatccttgtccccaagtgcgccttcctccagcctccagggggagcgctaaag
acaacgcttgctggtttccagaaaggggtcacagccctggatatttgcccagagagaggg
atcctgcttgcaggctcagaggacgggaaggtgattgcctgggacctcaatgatctagag
gtcatccaaaccttagtgggacacacagctaaggtgctatccgtgagagtgattgacagc
ggtgatcactgtctctcattggctgctgacgggagtctgaggaagtggagcctgctgagt
ggcaggcagctgtactgtacccaggaggcggtgtccattaactccttaccttccaccaca
cacatccatgtgtctgaggagagggcgcttgtcttcacccactctggaggccaagtgaaa
gtgtggcatcttaacacaacagaactactcttccaagtcaaagataccggtgtctccatt
attcttggatttttgaacggaatggtcgtctccctctcagacggaggacttgtcacattt
tcccacccctccgccgaggacaagacagcgcagatacatttggaaaaatcttcacatagg
ttgaccctgacggcaacccttacactgcaaaaacatggccgactacttatagcatcaaag
gagggcttcctatatcaggtttccagcactgaacaggacagacagtcacagtggactctg
agacagacagtcacagagcttccagtctgtgcaaccttcctctccgcctcagatgacgaa
aggatacttttggcaggctgtgagaggacactggtccttttccatagagagtccgactgt
gtccagagcttcctggatctgcaccatgaggacacggtgttgtgtgcctgtgtgtcgagc
gacagcagagtggtcgtctcgggctctgaggaccagacaatacgggtgtggtctataacc
acgggaaacctccttgactctttccttggcatggatgcccctgtcaccactctggctctg
tatgagggcactgtcgtctccgcctcctcctcagcctactacctgaagctgtggcatctg
ccctcacccaacgaccctcagcagagacccaaaggctgtattccagccggatgccctcag
gttgccctcactaaagatggcgacacggtgtactatgttagaaacataggccagaaagaa
gtgattacatggaattgtcacacaggtaaaaaaatacatatgtgcaccttatgctcttcc
actgacaccatggccgtctctgctgaggtgtgctgcctagagctggcccagcacaagaaa
ctcctcttctgtggcctcacgactggcacggtcctcatctaccccctagccttccccaaa
gagaccctgtgcattccacctcctgagaccctgcccacggtgcgctgcatggccattggc
ggccaggagaagcacatggccgtggcctacgaggactcagtgtgtctgttcgagatcacg
gctagggacagtttccccagcgtggaggggcccgccgcaaagtttgccctctccctgctc
cactcgcccgtctcctccatggccctgctcccagactgtaggctgctgtacgggacggcc
tgcggggaggtcaccatgtacgacttcaagtccacttcaaccgccaccctggatggccac
cgcagcagggtcaactgcgtgacgaccagcaactgggggacgcacgccctggtgggctca
gaggatgccgtgcagaggctgtgggggctgacccccctggtactggatcacaccatggag
tacaaggggttcttgtttgaaggggttctctgtgcagcgttctctgagagtgacaagcac
gtcttcaccggatcacaggatagaactattaaagtctgggatgttgctagtgggagtctg
ttatttgtccagtatgtctacgctcctgtcaccaaaatgttgacctacaggaatggcttc
gtggcaatttcccagctgggctacgtcatcaaggaaggattccgctgtccggatgacgtc
tgtccggaatacaacccactccggaatatcaacgcacactacagggtcacgtcccggcag
aagagtgcagacagccctcacagcgtcatcacaaagatccctgagtacaatcctgctcag
tttaacttcatggccctgatgctcaagagcaaaccctctcactcatgccaactgttgtaa
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