Salvelinus fontinalis (brook trout): 129810989 Help Entry 129810989         CDS       T11136                                  Name (RefSeq) roquin-1-like isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism sfon  Salvelinus fontinalis (brook trout) Brite KEGG Orthology (KO) [BR:sfon00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:sfon03000]     129810989    04121 Ubiquitin system [BR:sfon04121]     129810989 Transcription factors [BR:sfon03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     129810989 Ubiquitin system [BR:sfon04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     129810989 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf-CCCH zf-C3HC4 zf-C3HC4_2 zf-CCCH_4 zf-CCCH_UNK zf_CCCH_4 Prok-RING_4 zf-RING_6 Motif Other DBs NCBI-GeneID:  129810989 NCBI-ProteinID:  XP_055718019 LinkDB All DBs Position 14:complement(45766073..45789185) Genome browser AA seq 1071 aa AA seqDB search MPVQAPQWTEFLLCPICTQLFEESVRKPISLGCGHTVCKMCLNKLHRKACPFDQTAIASD IELLPVNTALLQLVGGQVPKRQPTTLLTGPEDIAHYEEASDCVEELALYLKPLSNSRGLS TSGAQSSLSRPMQRKLVTLVHCQLVEEEGRVRATRAARSLGERTVTELILQHQNPQQLSS NLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTS IGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAPD QWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELLA NIDPSPDSPPPTWELLDTGLVAVKTVVHGLVDFIQNHSKKGSDTQQPPQHSKYKTYMCRD MKQKGGCPRGASCTFAHSQDELEKYRKMNKRLAARRPLSLSLTQLNEVGLLPEEVGMMEG LAHKGLTNGMVASVTGSALPQLISRGADPSYEPIMRKPQSQGSHSAPGSPPDLLDPVPNR SMAYPRMAVDHLAMHKPVPRGPPMYPSQQGEHFYPPEPRAPPSAMQYESTQYPPGNPSYP YQTSQYLPQPRYVRNLPPPNDPATPTYPESPYPGTYPQEHECPPPPQPSGPHFSNANPHG YPPPPHYDGRRHPSYPPPPPQTYPHREEPSSMPADEASRERYPPEGYQPTGPHPSHMRPY ATREDYSRPQPTPTLDYLHRRRQEIMAQLEDRKQVTPPPFAPSPTLPHTYESNYTQEQQQ YMENSQVFAKYREPDYASQYSPWSCDTIGSYIGSKEGKSKDSMERMNTEGKGAEGQRRSA EARDDDPIIPFGSLPTVSRFGVISRTPKTGYQMAGPGQAVTPSQGTNSPKHTAATADYPY GNGAGWGVAPYTQPPQAHLSERPVQEREQLTMELQQVNRQINKQTAQAAQPSPGEWSSGS VSSQQLSLELHHVEREIGKRTRQIALENHVSHDGSGAYKLKPTENKMQREEHSLVLSEGC NGSSCVLLDGSVASSVLSCLTSKTSSLSLSSDLPTTGGTDRQENIAVHPCS NT seq 3216 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagcgccgcaatggacagaattcctgctgtgtcccatctgcacccagctg ttcgaggagagcgtccgcaagcccatcagcctgggctgtggacacaccgtctgcaagatg tgcctgaacaagctgcaccgcaaggcctgccccttcgaccagacggccatcgcttccgac atcgagctgctgcctgtcaacactgccctactgcagctggtgggaggacaggtgcccaaa cggcagcctaccaccttgctgacggggccagaggacatagcccactatgaggaagccagt gattgtgtggaggagctggctctgtacctgaaaccactgagcaacagcagagggttgagc accagcggtgcacaaagctctctgagtcggcccatgcagaggaagctggtgaccctggtg cactgtcagttggtggaggaggagggccgggtgagggccacgcgggcggccaggtccctg ggggagcgcacagtcactgagctcattctgcagcaccagaacccccagcagctctcctcc aacctgtgggctgcagtcagggcaaggggctgccagtttctcggcccagcgatgcaggag gaggctctgaagctggtcctgctggctctagaggacggctccgctctgtccaggaaggtc ttggtgctgtttgtggtccaaaggttagagccacgcttcccccaggcttctaagaccagc ataggccacgtggtgcagctcctctacagggcctcctgctttaaggtgaccaagcgagac gaggactcgtccctgatgcagctgaaggaggagttccggacatacgaggcactgcggcgc gaacatgactcccagattgtccagatcgccatggagggcggcctccgcatcgcccctgac cagtggtcctctctgctctacggggaccagtcacacaagtcccacatgcagtccatcatc gacaagttgcagacaccagcgtcgtttgctcagagcgttcaggagctgaccatcgccctg cagaggacaggcgacccggccaacctgaaccgtctgcgaccacacctggagctgcttgcc aacatcgaccccagcccagactccccaccccccacgtgggagctgctggacacgggcttg gtggcggtgaaaacggtggtgcacggcctggtggacttcatccagaaccacagcaagaag gggagcgacacgcaacagcctccccagcacagtaaatacaagacgtacatgtgtcgggac atgaagcagaaggggggctgtcctcgaggagccagctgcacctttgcccactctcaggac gagctagagaagtatcgtaagatgaacaagcgtctggctgcccgacggcccctcagccta tccttgacgcagctcaacgaggtgggcctattgcccgaggaggtggggatgatggagggg ctggcccacaagggcctgaccaatggcatggtggcatcagtcacaggctccgccctgccc cagctcatctcccgcggtgccgacccctcttatgagcccattatgcggaagccccagtcc cagggaagccacagtgcccctggctctccccctgacttactggatcccgtgcccaatcgg tccatggcctaccccaggatggcagtggaccacctggccatgcacaagccagtgcccagg gggccccccatgtatccctcacagcagggtgaacatttctatccccctgagcccagggca ccaccatcagccatgcagtacgagtccacccagtaccccccaggtaacccctcctacccc taccagacctcccagtaccttccccagccccgctacgttcggaacctccctccccctaac gacccggccacgcccacctacccggagtccccctaccccggcacctacccacaggagcac gagtgtccccctcccccccagccctcgggtccccacttctccaacgccaacccccatggg tacccacctccccctcattacgacggccgtcgacacccctcctacccgccgccaccacca caaacctatccccaccgggaggaaccctcctccatgcctgcggacgaggcctccagagaa agataccctcccgaaggttaccagcccactggcccccaccccagccacatgaggccctac gccacacgggaggattacagtcggccccagcccactcccactctggactacctgcaccgc cgacgccaggagatcatggcccagttggaggacaggaagcaggtcactcccccacccttt gccccctcgcccacgctgccacacacctacgagtccaactacacacaggagcaacagcag tacatggagaactcccaagtgtttgcaaagtaccgtgagccagactacgctagccagtac tctccttggtcatgtgacaccattggctcctacattggcagcaaggaggggaagtctaaa gacagcatggagaggatgaacactgaggggaaaggtgcagagggccagcgcaggtcggcc gaggccagagacgacgaccctatcatccccttcggctccctgcccaccgtgtcgcgcttc ggggttatctcccgcacccccaagacgggttaccagatggccgggccagggcaggccgtg accccctcgcaggggaccaacagccccaaacacactgctgcaacagcggactacccctat gggaacggtgcaggatggggtgttgccccgtacacccagccccctcaggcccacctcagt gaaaggccagtccaggagagggagcagctgacgatggaactccagcaggtcaatcggcag atcaacaagcagactgcccaggcggcccagcccagcccgggggagtggtcgtcggggagc gtctccagccaacagctgagcctggagctccaccatgtggagagggagatcggcaagagg actcgccagatagccctggagaaccatgtgtctcatgatgggagcggggcatacaagctg aagcccactgagaacaaaatgcagagagaggagcactcgttggttctcagtgagggctgt aacggttccagttgtgtgctgctggatggcagtgtggccagcagcgttttgtcctgcctg accagcaagacctcgtccctcagcctatcttcagacctccccaccaccgggggaactgac cgacaggagaacatcgcggtccacccgtgttcctag

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