Salvelinus fontinalis (brook trout): 129811058
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Entry
129811058 CDS
T11136
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129811058 (ccdc50a)
Membrane trafficking [BR:
sfon04131
]
Autophagy
Other autophagy associated proteins
Others
129811058 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
129811058
NCBI-ProteinID:
XP_055718151
LinkDB
All DBs
Position
14:complement(48584976..48618010)
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AA seq
657 aa
AA seq
DB search
MAEFPIDQNKLPGVKEVCRDFAVLEDHCLAHNLQEQEIESHLASNVHKSRLVQQDVALAK
QLQEEEDRRAQAKAKRQHRDIERSDNEIAQEIQEELVRQAEQQRKQEEKDAAIARKLQEK
EMKEERKRQKQLEANFEEEYYEDKGDIRVPLDLDDKPRRPGSNSHSPESHPLTPGSRRDL
SPKYVSFEPSRTRYPLYDSVEPSTSGRSRSPEHHLDSRGGGSRGKHGDPYPEDHLSNSRG
KHGGSYPDYHHPTEGRSRGKGGQRGRDPQGSQSTYPDSREPRRHREERGDEGEQVVVRRK
ERPARPPPPSHNPVEGDEAWEREREREWEKDRQREPRRDEERERDAPRHEERSRDGQRHG
QRSQDQEHSRDKHREKDRRRERTKSRERGLDEDYYEPIPSSHSRAWTVGGEEGPGEWGPM
ARLHSGPSELCEEAARSPRPGVMRGERRGHRDPGEGPSMGTERSYTHPAPREPGRIVQGG
PGGRGAVVVGGEYGMGEATQGIAKLDLREQEILDMEVARKLQEEEVKASKMDKRAAQVAQ
DEEIARLLMEQEKKEYKKSREKEKQGMRPEERGMRPEERRRPEGGEFKSNSEEVVRPRSR
EEEYQRHRNHQKPARPPQPLPHDYENVETSYSYSESHYSSRTPARPEAAYKGTYYRQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatttcccatcgatcaaaacaaactgcccggagtaaaagaagtgtgtcgagac
tttgctgtgctggaggaccactgcctggcccataatctccaggagcaggaaatcgagagc
cacttggcatccaacgtccacaagagccgtctggtgcagcaggacgtagcgttggccaag
cagctgcaggaggaggaggaccggagggcccaagccaaggccaagagacaacaccgggac
attgagcgcagcgacaatgagattgcccaggagatacaggaggaattggtccgacaggcg
gagcagcagcgcaagcaggaggagaaggatgcggccatcgctcgtaagctgcaggagaag
gagatgaaggaggagaggaagcgacagaagcagctggaggccaactttgaggaggagtac
tatgaggataaaggagacatccgagtccctctggacctggatgacaaacccaggcgacct
ggttcaaactcccactcccctgagtcacatccccttaccccgggctcacgacgcgacctc
tcccccaagtacgtttcttttgagcctagcaggaccagataccccctatacgactctgtg
gagcctagcaccagcggacgttcacgatcccccgagcaccatttagacagtaggggaggg
ggtagtaggggcaagcatggagacccataccccgaggaccacctctccaatagcaggggg
aaacatgggggcagttacccagactaccaccaccccaccgagggtagaagtagagggaag
gggggccagaggggccgagacccccaggggtcccagtccacctacccagacagccgtgag
cccaggagacacagggaggagagaggggatgagggagagcaggtggtggtgaggaggaag
gagaggcccgcccggccgcccccgccgtcccacaaccctgtggagggagacgaggcctgg
gagagagaaagagagcgggagtgggagaaagaccggcaaagagaacccaggagagacgag
gagagggagagggacgccccgagacacgaggagagatcgcgagacggacagagacatggg
cagcgatcgcaagaccaagagcatagccgagacaaacacagagaaaaagacagacgccga
gagagaaccaagagcagggagcgaggtctggatgaagactattacgagcccatacccagc
agccacagccgggcctggactgttggtggggaggagggccctggggagtgggggcccatg
gccaggctccactctggccccagtgagctgtgtgaggaggcggccaggagcccccgcccc
ggcgtgatgaggggggagaggagaggtcacagggaccctggggaggggcccagcatgggc
acggagcgctcctacacgcaccccgctcccagggagccaggtcgtatcgtgcaaggagga
ccagggggtcgcggcgcagtggtggtcggaggggagtacgggatgggtgaggccacccag
ggcatcgccaagctggatctgagggagcaggagatcctggacatggaggtggcccggaaa
ctacaggaggaggaggtcaaggcgagcaagatggacaagcgcgcagcccaagtggctcag
gatgaggagatagcccgcctgctgatggagcaggaaaagaaggagtacaagaagtccagg
gagaaggagaagcaggggatgaggccagaagagagggggatgaggccggaagagaggaga
cggccagagggaggagaattcaagtcaaactcggaggaggtagtgcgtcccaggtcccga
gaggaggagtaccagaggcacaggaaccaccaaaagcctgccagacctcctcaacctctt
ccacatgactacgagaatgtggagaccagctacagctactcagagagccactactcttcc
cgcactccagccagaccggaggctgcttacaaaggtacctattacaggcagtga
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