Salvelinus fontinalis (brook trout): 129811306
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Entry
129811306 CDS
T11136
Symbol
pax6b
Name
(RefSeq) paired box protein Pax-6b isoform X1
KO
K08031
paired box protein 6
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129811306 (pax6b)
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
129811306 (pax6b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
129811306
NCBI-ProteinID:
XP_055718523
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Position
1:7395018..7420122
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AA seq
462 aa
AA seq
DB search
MPQKEYHSQATWESGVASMMQNKVYDICDEGHSGVNQLGGVFVNGRPLPDTTRQKIVELA
HSGARPCDISRILQTHDDSKVQVLENENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVA
TPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSAVSVSSINRVLRNLASEK
QQMGADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQPQDGAGENTNSISSNG
EDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI
QVWFSNRRAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQPMPQPTTPVSFTSGSML
GRPDTALTNTYSALPPMPSFTMANNLPMQPSQTYSCMLPTSPSVNGRSYDTYTPPHMQAH
MNSQSMITSGTTSTGLISPGVSVPVQVPGGEPDMSQYWSRLQ
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaataccacagccaagccacgtgggagtctggcgtagcctcgatgatg
cagaacaaggtctatgacatctgtgatgaaggtcacagcggtgtgaaccagctgggcggt
gtgtttgttaatggtagaccgctaccggacaccaccaggcagaaaatcgtcgaacttgct
catagtggcgcgcggccgtgcgacatctccaggattctgcagacccatgatgactcaaaa
gtccaagtgctggaaaatgaaaacgtgtccaacgggtgcgtgagtaagatccttggcaga
tactatgagactggctccataagaccgagagcgatcggaggcagcaagccgagggtagcc
actccagaggtggtggggaagatagcgcagtacaagcgggagtgcccgtctattttcgcc
tgggagatccgcgacagactgttgtcggagggggtctgcaccaacgacaatatacccagt
gtaagtgcagtgagtgtgtcgtcgataaacagagtcctccgcaacctggctagcgagaag
caacagatgggcgcagatggcatgtatgacaagctgagaatgctcaacggtcagacagga
acttgggggacacggcccggctggtaccccggaacttcagtgccagggcagcccaaccaa
gatggctgccagccacaggacggtgctggagagaacacaaactccatcagttcgaatggg
gaggattctgacgagacgcagatgcgactccagctaaagagaaaactccagaggaaccgc
acgtcgttcacacaagagcagattgaagcactggaaaaagaatttgaacggactcattat
cctgacgttttcgcgagggaaagactggcagcgaaaatagatctgcctgaagcaagaata
caggtgtggttctcaaacagaagagcgaagtggaggcgggaggagaagctccggaaccag
cgtcgtcaggccagcaactcctccagtcacatccccatcagcagcagcttcagcaccagc
gtctatcagcccatgcctcagcccaccacaccggtgtccttcacatctgggtctatgttg
ggcagacctgacacggccctcaccaacacgtacagcgccctgcctcccatgcccagcttc
accatggccaacaacctgcctatgcaacccagccagacctattcctgcatgctgcctacc
agtccgtctgtgaatgggcggagctacgacacatatacgccccctcatatgcaggcacat
atgaacagccaatcaatgatcacttctggtaccacctcaacaggactcatctctcctgga
gtgtctgtccctgtccaagtcccaggcggcgagcctgacatgtctcagtactggtcaaga
ctacaatag
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