Salvelinus fontinalis (brook trout): 129811526
Help
Entry
129811526 CDS
T11136
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129811526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129811526
03021 Transcription machinery [BR:
sfon03021
]
129811526
03036 Chromosome and associated proteins [BR:
sfon03036
]
129811526
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
ARID
129811526
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129811526
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129811526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129811526
NCBI-ProteinID:
XP_055718881
LinkDB
All DBs
Position
15:complement(20757192..20845525)
Genome browser
AA seq
1793 aa
AA seq
DB search
MGLIPQDCPSSLPDLSGSIDDLPTGTDAGHSSAVSATGSTSSQGEQSNPAQSPFSPHASP
HLSGQGSGPSSSPVGSPVGSNQSRSGSGPISPVSGPTTAPGSQMAPQTPGNMLDVPHPPL
SQSPMRQERGFMSNMQRNPSGSQFAPPPQSGPSMSPHPSPGPVGQMYPGMGPYPQGGSSG
PYGPQGSQANQYGPQGNYPRPPNYGGTPSANYSSPGPGPGMTNSQGMNASSPMHGQGPGQ
PMGRSPGAGSRPYPNMAPSSPSMPQPAGPGMGPPSLGNVNRKAQEAAAAVMQAAANSVQG
RQGSYPGPGMNLMGTAGSGAPYNQSPGNNSGMGTPQGPPYNMPPSGAVGMSVSGMMNPDG
KQKTGGKEENMPTNEPPKLKDGHSGSQCVSMPTTPGAMLVPSPLSPSPASLSSYHGDDSD
SISSPVWPKTPSSPKLNSSTMTSERITRLYDMGGEPERRGWVDRYLSFMEERGTPVPQLP
AVGKKPLDLCRLYMAVREIGGLAMVNKNKKWRELSTNLSVGTSSSSASCLKKQYIQYLFA
YECKVERGEDPPADSNTGTGGENRKQAKVQLPSPANSGSLQGPQTPQSSGSSSMAEMSGD
LKPPTPATTPQGQVTPIPASRSSVVSVQDPFSEVSDPVFQKRNSLPPGGPGGPYQQGVNM
PPNMMMRMQYEKDPFVGMRKVAGGEPYMPGQMTSGGIQDMYGRSTSGMGQRSQYPYGPGY
DRRPDHLMGMEGSMGPPGNQSNMGPSNSEGSIYSPNRYPSQQRHEGYVQQYPGMSYGMHP
SGMYPQQQRPMEGMYGSPGKRHEGEMYSPPAKRHEGEMYGPPAKRHEGEMYGAPAKRHEG
EMYGPPTKRHEGEMYGPPAKRHEGEMYAMQYRGQQPDMYNHYTTGYSGPERRPMQGQFPY
PSPYSRERMQASGQGQHPMGPQMMSGGPLSNNGVEGPQGPNMWPSRTDMGYPYPNRQGAP
SQVPPYGPMGRGDDLEGRPIQDGQWLGHGGHRQSSYMSGGMTPMSSRQPPSAYQTSPSMA
NHLPRAPSPGSFQRSMEARMSPNKAVFMGSMKMPGKPGMPMPGQGNGHPGQVAPNLLRDL
NYPLGSVEATMPVFKPRRKITSKDTGTPEAWRVMMSLKSGLLGESTWALDTINILLYDDR
SVASFTLTQLPGFLELIVEYFRRCVMEIFGILEEYEIGTIGQKTLLGAEACDQGEELTSE
PEMDCEASQPEPEQEQEVERGETEKGEVEKREEKPVDITEKMTTEGMSPPSATEPAPEGT
KEESEAEMKVKKEEGEKEEEGEKEEDGEKEKGKENEESEKPTESKEASAESKEDSPYQAP
SEHEPRPQQASKYDKFPVKILHKEDLIEDMTEQLGHVTEFTSGLLHWQAGGGDSTAHIQA
HFECRGEHTDRMEGERKECASLNKEQDTEGGKQTEKGITATIDDILCARLGALSEGHPTH
SAPTYPFRLHQGGGHQHITLLEDEPRCLDEAPLSTSSPWQDSLAKRCLCVSNIIRSLSFI
PGNDSDMSRHPGLVLILGRLLLLQHQHPERKRTPPSYQREEVQERGLACSKDEWWWNCLA
TLRENTLVTLANISGQLDLSLYPETICLPILNGLLHWMVCPSAEAQDPFPSGTPHSPLTP
QRLVLECLCKLSIQDNNVDLLLATPPFSRQEKMYATLVRYVGQRKNQVYREMAVATLSNL
AQGDSTAARAIAIQKNSVGNLMGFLEDGVSMAQYQQNPHSMLHMAHHPPMEPPSINMMCR
AAKALLAMAKVEENRPEFVLYEGRILDISISSVLNQGVTSIICEVLFQFVKKL
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgatcccgcaggactgcccctccagcctcccggacctgtctggctccatagac
gacctccctacagggacggacgctggtcacagttcagccgtcagtgctacaggctccacc
agtagccagggggagcagagtaacccagcccagtcacccttctcaccccacgcgtcaccc
cacctgtctggtcaaggcagcggcccatcgtcctctcctgttgggtcccctgtgggctcc
aaccaatcacgctccggctctggccccatctcccctgtcagcggcccaaccacagcacca
ggttcccagatggccccccagactcctggcaacatgttggatgttccccacccccccttg
tcccagtcccccatgcgtcaggaaaggggctttatgtccaacatgcagagaaacccgtct
ggctcccagtttgcaccaccacctcagtcggggccctcgatgtcccctcacccctctcct
ggtcctgtgggacagatgtacccagggatggggccctacccccaaggtggctccagtggc
ccctatggaccccagggatcccaggcaaaccagtatggaccccaaggaaactacccacgt
ccacccaactacggcgggacccccagtgccaactacagcagccccgggcccggccctggc
atgacaaacagccagggtatgaatgccagcagccccatgcacggccagggtcccgggcag
cctatgggccgcagtcctggtgcgggcagccgcccctaccccaacatggcccccagctcc
cccagtatgccccagccagccggccctggaatgggccctccttcactgggcaatgtcaac
cgcaaggcccaggaggcagcagccgccgtcatgcaggccgcagctaactctgtacagggc
agacagggcagctacccaggccctggcatgaacctgatgggaacagcaggatctggagcc
ccctacaaccagtcaccaggcaacaactcaggcatgggcacaccacagggtccgccctac
aacatgccaccctcaggggccgtggggatgtctgtgagtgggatgatgaatcctgatggg
aagcagaaaacaggtggcaaggaggagaacatgcccaccaatgaacctccaaaactaaag
gatgggcacagtggatcccagtgtgtctccatgcccaccacccctggtgccatgcttgtc
ccctctcccctgtcccccagcccagccagcctgtcctcctaccatggggatgacagcgac
agcatcagcagccccgtctggccaaagactccctccagccctaagctcaactcgtccacc
atgactagcgaacgaatcacgcgcctgtatgatatgggtggggagccggagaggcgtggc
tgggtggaccggtacctgtccttcatggaggagaggggtacacctgtcccccaacttccc
gccgtgggcaagaagcccctggacctctgcagactctacatggctgtcagggagataggg
ggcctggccatggtgaacaagaacaagaagtggcgtgagctgtccaccaatctgagtgtt
ggtacctccagtagctccgccagctgtctgaagaagcagtacatccagtacctgtttgcc
tatgagtgtaaggtggagcgaggagaggacccgccggccgacagcaacactgggactggg
ggggaaaacaggaagcaggccaaggtgcagctgccctctcctgctaactcagggtccctt
cagggcccccagaccccccagtcatcaggcagcagctccatggcagagatgtcaggtgac
ctgaagcctcccaccccagccaccaccccccagggacaggtcacccccatcccagccagc
aggagcagtgttgtgagtgtgcaggacccgttctctgaggtgagcgacccggtcttccag
aagcgtaactccctccccccggggggccctgggggaccgtaccagcagggggtcaacatg
ccccctaacatgatgatgaggatgcagtacgagaaggaccccttcgttggcatgagaaag
gtggcaggaggggagccctacatgccaggccagatgaccagtggtggcatacaggatatg
tatggcaggtctacatcaggcatgggccagcgctcccagtacccatatggaccaggctac
gacaggagaccagaccatctgatggggatggaggggagcatgggcccccccgggaaccag
agcaacatgggaccttccaacagcgagggcagcatttactctcccaacagatacccctcc
cagcagagacacgaaggctacgtgcagcagtaccctggcatgtcatatggaatgcacccc
tcagggatgtaccctcaacaacagcgccccatggagggcatgtatgggtccccaggcaag
agacatgagggggagatgtacagccccccagcaaagagacatgagggggagatgtacggc
cccccagcaaagaggcatgagggggagatgtacggcgccccagcaaagagacatgagggg
gagatgtacggccccccaacaaagagacatgagggggagatgtacggccccccagcaaag
agacatgagggggagatgtatgccatgcagtataggggccagcagcctgacatgtataac
cactacaccactggttactctggacctgagaggaggcccatgcagggccagttcccctac
ccttccccctatagccgagagcgcatgcaggcctctggccaggggcagcaccccatgggc
ccccagatgatgtccggggggccactctctaacaacggagtggaaggaccccaggggccc
aacatgtggccctccaggacagacatgggttatccctaccccaacagacagggggcaccc
tctcaggtaccgccatacggtcctatggggagaggagatgatttggagggccgacccatc
caggatggtcagtggcttgggcacggaggccatcgccagtcctcctacatgtcaggtggt
atgacccccatgtcctcccgccagcccccctctgcataccagacctccccctccatggcc
aaccacctgccccgagcccccagccccggctccttccagcgctccatggaggcacgcatg
tcccccaacaaagctgtctttatgggctccatgaagatgccaggcaaaccagggatgccc
atgccagggcagggtaatgggcacccaggccaagtcgcacctaacctgctaagagatctc
aactaccctctaggatctgtagaggccaccatgcccgttttcaagccacgtcgcaaaatt
acctccaaagacactggaaccccagaggcgtggcgagtgatgatgtctctgaagtcaggt
ctgctgggtgagagtacgtgggccctggacaccatcaacatcctgctgtatgatgacaga
tctgtggcctccttcaccctcacacagttgcctggcttcctggaactgatagtggagtac
ttcagacgctgtgtgatggagatctttggcatcctggaggagtatgagatagggaccatc
ggccagaagaccctccttggggctgaagcctgtgaccagggggaggagctgacctctgaa
cctgagatggactgtgaggccagccaaccagagcctgagcaggagcaggaggtggagagg
ggggagacggagaagggggaagtagaaaagagggaggagaaacctgttgacatcacagag
aaaatgacaacggaaggtatgtcaccccccagtgcaacggaaccagcccctgagggaacg
aaggaggaatctgaagccgagatgaaggtaaagaaggaggagggggagaaagaagaggag
ggggagaaagaagaggatggggagaaagaaaaagggaaagagaatgaggagagtgaaaag
ccaaccgagagtaaggaagcctcagctgaaagtaaggaagactctccttatcaggctcct
tcagagcacgagccaaggccacaacaggccagcaagtacgataaattccccgtcaagatc
ctgcacaaagaggacctgattgaggacatgacagagcagctgggccacgtgacagagttc
actagcggactgctccactggcaggcaggcgggggtgattccaccgcccacatccaggcc
cactttgagtgcaggggagagcacactgacaggatggagggagagagaaaggaatgtgcc
agtctcaataaagaacaggacacagaggggggaaagcagacagagaagggtatcactgcc
accatcgatgatatactgtgtgcccggttaggggctttgtcagagggccaccctacccac
tctgcccccacctaccccttcagactgcaccagggagggggacaccagcacatcaccctg
ctagaggacgagccccgctgtctggacgaggctcccctctccacgtcctccccctggcag
gactccctggccaaacgctgcctctgtgtgtccaacatcatccgcagcctctccttcatt
cctgggaacgactcagacatgtcccgtcacccaggcctggtgctgatcctgggcagactg
ctgctgctacagcaccagcacccagagaggaagaggacgccccctagctaccagagagag
gaggtgcaggagcggggcctggcctgcagtaaggacgagtggtggtggaactgtctcgct
acactcagggagaacaccttggtcactctggctaacatctctggccagctggacctgtcc
ctctaccctgagaccatctgcctgcccatcctgaacggcctgctccactggatggtgtgt
ccctctgccgaggcccaggaccccttcccctcaggcaccccccactcgcccctcaccccc
cagagactggtgctggagtgcctttgcaagctgagcattcaggacaacaacgtggacctg
ctgctggccacgccgcccttcagccgccaggagaagatgtacgccaccctggtgcgctac
gtgggccagcgtaagaaccaggtgtaccgcgagatggccgtggccaccctatccaacctg
gctcaaggagactctacggcagcacgtgccatcgccatacagaagaatagtgtgggtaac
ctgatgggcttcctggaggatggagtgagcatggcccagtaccagcagaacccccacagc
atgctgcacatggcccaccacccccccatggagccccccagcattaacatgatgtgtcgg
gctgccaaagctctgctggctatggcaaaggtggaggagaacaggccagagtttgtcctg
tatgagggacgaatcctggacatctccatctcctctgtgctcaaccaaggggtgaccagc
atcatatgtgaagtactttttcagtttgtaaaaaaattatga
DBGET
integrated database retrieval system
