KEGG   Salvelinus fontinalis (brook trout): 129811556
Entry
129811556         CDS       T11136                                 
Name
(RefSeq) probable histone deacetylase 1-B
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon03082  ATP-dependent chromatin remodeling
sfon03083  Polycomb repressive complex
sfon04110  Cell cycle
sfon04330  Notch signaling pathway
sfon04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129811556
   03083 Polycomb repressive complex
    129811556
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    129811556
   04350 TGF-beta signaling pathway
    129811556
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    129811556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sfon03036]
    129811556
Enzymes [BR:sfon01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     129811556
Chromosome and associated proteins [BR:sfon03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     129811556
   HDAC complexes
    Sin3A-HDAC complex
     129811556
    BRAF-HDAC complex
     129811556
    REST complex
     129811556
    SHIP complex
     129811556
    MiDAC complex
     129811556
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     129811556
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    129811556
  Chromatin remodeling factors
   NuRD complex
    129811556
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 129811556
NCBI-ProteinID: XP_055718932
LinkDB
Position
15:complement(22592377..22602673)
AA seq 497 aa
MALSSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
SGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMTKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEEDPNKRISIRAHDKRIACDEE
FSDSEDEAEGQGGGRRNAASFKKAKRTKTEEDKEKEGEEKKAGDEKKADDKKEVKEEKVP
EEEKMDTKGPKEESKTP
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggcgctgagttctcaaggaacaaagaaaaaagtttgctactattatgatggtgatgtt
gggaattactactatggccaggggcatcccatgaagccacaccgtatccgcatgacacac
aacctcttgctgaactatggtctctacagaaagatggagatataccgacctcacaaagcc
agtggagaggagatgaccaagtaccacagtgatgactacatcaagttcctgcgttccatc
cggcctgacaacatgtcggagtacagcaaacagatgcagagattcaacgttggtgaagat
tgccctgtgtttgatggcctgtttgagttctgccagctctcaacaggaggctctgttgct
ggagctgtgaagctgaacaaacagcagacagacattgctattaactgggctggaggtctc
catcacgccaagaagtcggaggcgtcaggtttctgctatgtgaatgacattgtgctcgcc
attttggagttactgaaataccaccagagagttctgtacatagacattgacattcaccat
ggagatggagtggaggaagcgttctacaccacagaccgggtcatgaccgtgtccttccac
aagtacggagagtacttccccggcactggagacctgagggatattggcgcagggaaaggc
aagtactatgctgtgaattaccctctgagagatgggatagatgacgagtcttacgaagcc
atattcaagcctatcatgactaaagtgatggagatgtaccagcctagtgcagtggttctt
cagtgtggagctgactctctctcgggagacaggcttggctgctttaacctcaccatcaaa
ggccatgctaagtgtgtggagtacatgaagagcttcaacctgcccctgctgatgctgggg
ggtggaggctataccatccggaacgtggcccgctgctggacctatgagacagctgtggcc
ctagacagctccataccaaacgagcttccatacaatgattactttgagtactttgggcca
gacttcaaactgcacatcagtccctccaacatgaccaaccagaacaccaacgactacctg
gagaagatcaagcagcgtctgtttgagaaccttcgaatgctgccccacgccccgggggtc
cagatgcaggccatcccagaagacgccgtgcaggaggacagtggagacgaggaggaggaa
gaccctaacaaacgcatatccattcgcgcccatgacaagaggatagcgtgtgacgaggag
ttctcagactctgaggacgaggctgagggtcaagggggcggacggagaaatgctgccagc
ttcaagaaagccaagagaacaaagactgaagaagacaaagaaaaagagggagaagagaag
aaagcaggtgatgaaaagaaagctgatgacaagaaagaagtaaaagaagaaaaggtgcca
gaggaggagaaaatggacacaaaggggccaaaagaggagtccaagacaccgtga

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