Salvelinus fontinalis (brook trout): 129811749
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Entry
129811749 CDS
T11136
Symbol
hif1ab
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha b isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04137
Mitophagy - animal
sfon04140
Autophagy - animal
sfon04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129811749 (hif1ab)
04137 Mitophagy - animal
129811749 (hif1ab)
04148 Efferocytosis
129811749 (hif1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129811749 (hif1ab)
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
129811749 (hif1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
DUF2706
Motif
Other DBs
NCBI-GeneID:
129811749
NCBI-ProteinID:
XP_055719280
LinkDB
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Position
15:29837284..29860404
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AA seq
765 aa
AA seq
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MFSFTLDGSDRSPQTVLSKSSRVSSDRRKEKSRDAARCRRGKESEVFYELAQELPLPHSV
TSNLDKASIMRLAISYLHMRNLLSTDDEEEQEESELDSQLNGSCLKALEGFLMVLSEDGD
MIYLSENVNKCLGLAQIDLTGLSVFEYTHPCDHEELREMLVHRTGTSKKSKEPNTERSFF
LRMKCTLTNRGRTVNVKSATWKVLHCSGHVRVHEDPAEQSPGGHKEPSVPYLVLVCDPIP
HPSNIEAPLDTKTFLSRHTLDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLM
KTHHNLFAKGQVSTGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNYVLSGIEEE
KMMLSLEQTEDMRPVKKELEEEESSEAEVSPVLMKEKSPELDVIKLFTRAVEAQPLSSLY
DRLKEEPEALTLLAPAAGDTIISLDFSSPDSDILQKEVPLYKDVMLPSTSDKLALPLSLL
PPSDQHLVPSTSVDTKAGPDSSSTPGSHSFTEPDSPLDFCFPMESDISAEFKLDMVERLF
AIDTEPKTPFTLQAMEDLDLEMLAPYIPMDDDFQLRTLSPEPLSCGPAQPLEISSLCSSV
HLIQEVHSYPGSPFNASGSLAASPALAAPEPADSPCPASLLTKTVPQMDGEISLRSLASQ
NAQRKRKMSLSQAVGIGGLLQDRPGPGKKLKVSELGHSDAPSNRTILLLPTDLASRLLGI
SSEGSGSPFTLPQLTRYDCEVNAPVGGRQLLLQGEELLSALDQVN
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttcacactggacggtagtgacagatcaccccaaacagttctaagtaaaagc
agcagggtgagctcggaccggaggaaggagaagtcccgggatgcggcgcgatgcaggagg
gggaaggagtcggaggtgttctacgagctggcccaggagctgcccctgccccacagcgtc
acctccaacctggacaaggcctccatcatgagactggccatcagttacttgcacatgagg
aatctgctgagcacagacgatgaggaggagcaggaggagagtgagctggactcccagctg
aatggctcttgtctgaaggctctagagggcttcctcatggtgctgtctgaggacggggac
atgatctatctctctgagaatgtcaacaagtgcttgggtctggcacagattgacctgaca
ggacttagtgtgtttgagtacacacacccctgtgaccatgaggagctgagggagatgctg
gtacacagaacagggacctctaaaaagtcaaaggaaccaaacacagaacgcagcttcttc
ttgcggatgaaatgtaccctcaccaacaggggtcgcactgtcaatgtcaaatcagccacc
tggaaggttctccactgctcaggccatgtgcgggtccatgaagacccagctgagcagagc
cccggtgggcacaaggagccgtccgtcccctacctggtgctggtctgtgaccccatcccc
cacccctccaacatcgaggcgccgctggacaccaagactttcctcagccgccacacactg
gacatgaagttcacctactgtgacgagaggatcacagagctgatgggctatgatccagag
gacctgttaaatcgctctgtgtatgagtactaccacgccctggactcagaccacctcatg
aagacccatcacaacttgtttgcgaagggccaggtgagcacaggccagtaccgcatgctg
gctaagagaggaggctttgtgtgggtggagactcaggccactgttatctacaacaacaag
aactcccaaccccagtgtgttgtgtgtgtcaactatgtgctcagtggcattgaggaggag
aagatgatgctgtctctggagcagacggaggatatgaggcctgtgaagaaggagctagag
gaggaggagagctctgaggcagaggtgtcccctgtgctcatgaaggagaagagcccagag
ctggatgtgatcaagctgttcacccgggcggtggaggcccagcccctgtccagcctgtat
gacagactgaaggaggaaccagaggccctcacccttctggccccggctgctggagacacc
atcatctccctggacttcagcagccccgactctgacatcctgcagaaggaggtgcctctc
tacaaggatgtgatgctgccctccaccagtgacaagctggccctgccactctctctgctg
ccccccagtgatcagcacctggtgcccagcacctcagtggacaccaaggctggtccagac
tcctccagcaccccaggcagccacagcttcactgagcctgacagcccattggacttctgt
ttcccaatggagtctgacatcagtgctgagtttaaactggacatggtggaaagactgttt
gccatcgacacagagccaaagactcctttcaccttgcaggccatggaggacctggacctg
gagatgttggctccgtacatccccatggatgatgacttccagctgcgcactctgtcccca
gagcctctgtcttgtggcccagcccaacccctagagatctcttctctgtgctcttctgtg
cacctcatccaggaggtccacagctaccctggctcccccttcaatgcctcgggcagcctg
gcagcttccccagccctggcagccccggagccagcagatagcccttgccctgcttcctta
ctcaccaagacggtgcctcagatggacggggagatctcccttaggtcactggcctcccag
aatgcacaacgcaagaggaagatgtctctgtctcaggctgtcggaatagggggattgctc
caggaccgtcctggtccaggtaaaaagctcaaagtgtctgagctgggccactctgatgct
ccctccaacaggaccatactgctcctgcctacagacctggcaagccgtctgcttggcatc
tcatcggagggcagcggctcacccttcacccttcctcagctgacccgatatgactgtgag
gtcaatgcccccgtgggaggtcgccagctcctgctgcagggcgaggagctgctgagtgcc
ctggaccaagtcaactga
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