Salvelinus fontinalis (brook trout): 129811948
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Entry
129811948 CDS
T11136
Name
(RefSeq) zinc finger SWIM domain-containing protein 6-like
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129811948
Cilium and associated proteins [BR:
sfon03037
]
Other cilia and associated proteins
Stereociliary proteins
129811948
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
ZSWIM_N
TPR_ZSWIM8
SWIM
Motif
Other DBs
NCBI-GeneID:
129811948
NCBI-ProteinID:
XP_055719718
LinkDB
All DBs
Position
2:11672383..11739197
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AA seq
1136 aa
AA seq
DB search
MAERVQQPPAKRLCCRPGYNTNCRQGQRAGGTLCGGSGAAQGGSSKTQTPESLLDISARK
VAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFSTGGEESGTSGENSDET
RLPFRRGIALLESGCVDNVLQVGFHLSGTVTEPATPSESELVCSVSVSFDRCKITAVTCS
CGNKDIFYCAHVVALALYRVRKPEQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVL
PTAQKLADEILSTNSEINQVHGAPDPTAGASVDDENCWHLDEEQVQEQVKLFLSQGGYHG
SGKQLNLLFNKVREMLKMRDSNGARMLTLITEQFMGDPRLALWRQQGTTMTDKYRQLWDE
LGTLWMCIVLNPHCKSEQKCVWLRQLRRWNSVDVCPWEDGNHGNELPNLTHALPHGNPDL
LSRPHRTVFTRAIEACDLHWQDTHLQRVITHDLCTHTHTHTHCPHDNHGSGGALFDARGW
PLWHEHVPTACARVDALRSHGYPREALRLAIAIVNTLKRQQQKQLQLLRNHKKELLHKGM
TSVTNMEGWVGHPLDPIGTLFSTLLDTGRGDEEGGNAFLDFSGSVSSAKRLEPHLFTAQH
FLDDGQSFIALAVETALIGLGQQRVMPDGLYAQEKVCRNEEQLLAKLQEVELNDALVKIF
RKQAVFLLEAGPYSGLGELLYRESVPMHTFAKYLFTSLLPHDAELAYKIALRAMRLPVLE
TTAPSGDLSRPHHIVSMVPNRYPRWFTLSHIESQQCELASTMLTAAKGDGRKLETVLESI
QKNIHSSSHIFKLAQDAFKIATLMDSLPDLTLLKVSLELGLQVMRMTLSTLNWRRREMVR
WLVTCATEVGVYALDSIMQSWFTLFTPTEATSIVATTVMSNTTIVRLHLDCHQQENLASS
ARTLALQCAMKDPQNCSLSALTLCEKDHIAFETAYQIVLDAAVTGMSYTQLFTIARYMEH
RGYPMRAYKLATLAMAHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAVIPLVVKSVK
CATVLSDILRRCTLTTPGMVALHSRRNSGKLMSLDKAPLRQLLDATIGAYINTTHSRLTH
ISPRHYSEFIEFLSKARETFLMAQDGHIQFTQFIDNLKQIYKGKKKLMMLVRERFG
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcgttcagcagcccccagcaaaacggctctgctgtagaccgggttataac
acgaattgtagacagggacaacgggccgggggtacgttatgtggcggttcgggtgcggca
caaggcgggtcgagcaaaacccagaccccagagtctctgttggacatctcggcccggaaa
gtggctgagaagtggccgtttcaacgggtagaggagcgcttcgaacggatcccggagcct
gtacagagacggatcgtttactggtctttcccaaggagtgaacgggagatctgcatgtat
tcttcgttcagtacagggggagaggagagtggaactagtggggaaaatagtgatgagacg
cggctgcctttcagacgaggcatcgctctattggagagcggctgtgtggacaacgtattg
caagtcgggttccacctcagcggaacggtaacagaaccggccacgccgtcggaatccgag
ctcgtctgcagcgtgagtgtcagcttcgaccgctgcaagatcaccgcggtcacgtgcagc
tgtggcaacaaggacatcttctactgcgcgcacgtggtagcacttgccttgtaccgcgta
cggaagcccgagcaggtcaaactgcacctgcccatctcagagacactgttccagatgaac
agagaccagctgcagaaatttgtccagtacctgataacagtacaccacacggaggtgctg
cccactgctcagaaactagctgatgagattctgtcaacaaactctgagatcaaccaggtc
catggagccccagaccccacggcaggggccagtgtagatgatgagaactgttggcacctg
gatgaggagcaggtccaggagcaggtgaaactcttcctctcacagggaggataccacggc
tctgggaaacaactcaacctgctgttcaacaaggtgagagagatgttgaagatgcgtgac
tccaacggtgccaggatgttaacactgatcacagaacagtttatgggcgaccctcgtctg
gcactgtggagacaacagggaaccaccatgaccgacaaatacagacagctgtgggatgag
ttaggtaccctgtggatgtgtattgtgctgaacccccactgtaagtcggagcagaagtgt
gtgtggctgagacagcttagacggtggaacagcgtcgatgtgtgtccatgggaggacgga
aaccatggcaacgaactacccaacctcacacacgcactaccgcacggcaacccagacttg
ttgtctcgtcctcataggacagtgtttacgagggccattgaggcctgcgacctgcactgg
caggacacacatctgcagcgcgtcatcacacatgacctctgcacacacacacacacacac
acacactgtccccacgacaaccacggcagtggaggggcactgtttgacgcccgcggctgg
cccctctggcacgagcacgtcccaacagcgtgtgcgagggttgacgcgctgcggtcacat
ggttatcccagagaagccttgcgattggccattgctattgttaacacactcaagcggcag
caacagaaacaactacagctcctccgcaaccacaaaaaagagctgctccataaaggcatg
acctcagtcactaacatggagggctgggtgggccaccccctggaccctattggcactctg
ttcagcaccctactggacacgggacgaggagacgaggaggggggcaacgccttcctagac
ttctcaggctctgtgagttcagccaaaaggttggagccccacctcttcacagcacaacac
ttcctggacgatggccaatcgttcatagcactggctgtagagacggctctgattggctta
gggcagcagagggtgatgcctgacggcctatacgcccaggagaaggtgtgtcgcaacgaa
gagcagctattggccaagctccaggaagtggaactgaacgatgccctggtcaagatcttc
cgcaagcaagcagtcttcctgctagaggctggtccatacagtggtctaggagagttgctc
tacagagagagtgttcccatgcatactttcgccaagtatctcttcacctccctactacct
cacgacgctgaactggcgtacaaaattgcactgagagccatgaggttaccggtcctggaa
accacagctccatcaggtgatctatccagacctcaccatatagtatctatggtccctaac
cgctaccctcgctggttcactctatctcacatagagtcacaacaatgtgaactggcctcc
accatgcttaccgcagccaaaggcgatgggcgtaagttagaaacggtgttagagtccatc
cagaagaacatccactcctcgtctcacatcttcaaactggctcaggatgccttcaagatc
gctactctgatggacagcctgccagacctcacactgcttaaagtctcactggagctgggc
cttcaggtgatgagaatgactctgtccacattgaactggaggaggagagagatggtacgg
tggctggtcacctgtgccacagaagttggtgtgtatgcgttggacagcatcatgcagagt
tggttcaccctgttcaccccgaccgaggccaccagcattgtggccaccaccgtcatgtcc
aacaccaccatcgtccgcctgcacctggactgtcatcagcaggagaacctggcctcctcc
gcccggaccctggccctgcagtgtgccatgaaggacccccagaactgttccctctccgca
ctcaccctctgtgagaaggaccacatcgccttcgagacggcctaccagatcgttctggac
gcggccgtcacggggatgagctacacacagctctttacgatagccaggtacatggagcac
agaggatatcccatgagggcatacaagctggccacgctagccatggcccaccttaacctc
agctacaaccaggacacccacccggctatcaacgacgtgctgtgggcctgtgctctgagt
cactctctggggaagaatgagctggctgcagtcatccccctggtggtgaaaagtgtgaag
tgcgccactgtgctgtcagacattttgagacggtgcacattgaccacgccgggcatggtg
gcactgcacagccgcaggaactctgggaagctgatgtcgctggacaaggctccactcagg
caactgctggacgccaccatcggagcctacatcaacaccacgcactctcgcctcacgcac
atcagcccgcgccactacagcgagttcatagagttccttagtaaggccagagagacgttc
ctcatggcccaggacggacacatccagtttacccagttcatagacaacctcaaacagatc
tacaagggcaagaagaaactcatgatgcttgtacgggagaggttcggttaa
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