Salvelinus fontinalis (brook trout): 129811950
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Entry
129811950 CDS
T11136
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129811950
Membrane trafficking [BR:
sfon04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129811950
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
129811950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_HPS5
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
Synaptobrevin
WD40_like
CFAP43_N
PEP5_VPS11_N
RAB3GAP2_N
WDR54
Motif
Other DBs
NCBI-GeneID:
129811950
NCBI-ProteinID:
XP_055719719
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All DBs
Position
15:complement(39060752..39108201)
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AA seq
1182 aa
AA seq
DB search
MKKFNIRKVLDGLGASFSAASPQPGTSQNDVIQETLQSEHFQLCKTVRHGFPYQPSSMAF
DPVQKILAVGTQSGAVRLFGRAGVECYCQHESGAAVIQLQFLVNEGALVSALADDSVHLW
NLRQKQPAILHTLKFNRERITFCHLPFQSKWLYIGTEKGNIHIVNIESFTLSGYVIMWNK
AIELSSKSHPGPVVHISDNPIDEGKILIGFECGSVVLWDLKCKKADYRYNYDEAIHSVAW
HHEGKQFTCSHSDGTLTTWNVRVPAKPTITITPHGKQPKDGKKPEPCKPILKVEYKTTRA
GNAFVIMSGGLSYDTGCRRACLTVMHGKSTALLEMDYPIVDFLTLCETPYPNDFQDPYAV
VVLLEKDLVVIDLRQIGYPIFENPYSLSIHKSPVTCVEYFADCPPELIPALYSVASWQKR
PGYSKKEWPISGGNWGQGTLSYPEIIVTGHADGSINFWDASAIMLQVLYKLKTAKVFEKA
LKGGKEEKPSTEIVDEDPYAIQTLSWCPESRMLCVAGVSAHVIIYRFSKQEITTEVVQLL
EVRMQCELDVVDSPDTAGERPPTPVHYSCPTQEGDPPETQPSTTDDGPRDNVPCLKVRSS
PLKQSPGYQVELVIQLVWVCGEPPQQITSLAVNSLYGLVVFGNSNGLAVVDYLQKSLLLN
MGTSELYSPSDPYQRQPRSPRKKRHPSGALSDNNNGNNALEEKSNKSPTSGSTSPTNSDD
EHKQKRFIQKVKSKSRRFSKTVANDFAKMSRKICSPTEQKTDLEKRVRRQHSLPYKKRFC
CVKEGKEPRKSLSQQRTLSVPYLNAKDSLFSRSRSSSVTSIERESREAISSFHFSESFPR
KTDSSGSPSLWVGTTQGTVLGLALSLPPTGDLRLQQPVRVSSCGTLVRLKGGILTMAFLD
SLGAVLPPSYEPWSEPNPPDEEKEKARRRRPASPPPTQEGQDSQYAVVCSEKQAKVVGLP
SQSCFFKHNITESSFVLRADVVQMAAGLCLACFCANGHIMALSLPSLRPLLDVNYLPLTD
MRIARTFCFSNLGQAMYLTSPTEIQRITYSQETCDNLQEMMGELFTPIETPEAPNRGFFK
GLFGGGAQSLDREDLFGETAAGKASRSLAQHIPGPQGMEGMKGAASGVVGDLARARIALD
ERGQKLGELEDRTAAMMSSADSFSKHAHDMKLKYKDKKWYQL
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaatatcagaaaggtgctggacggcttgggtgcttcattttccgctgca
tctccacaaccgggaactagtcaaaacgatgtgatccaagagacactacagtcggagcat
tttcagctctgtaagactgtgcgacatggcttcccttaccagccctcctccatggccttt
gaccctgtgcagaagattctggctgtcgggactcagagcggagctgtgagactttttggc
cgtgcgggcgtggagtgttactgtcaacatgagagtggtgcagctgtcattcagctccag
ttcctggtcaacgagggggcgctagtcagtgccttagctgatgacagcgttcatctgtgg
aacctgaggcagaagcagccagctatcttgcacactctcaaattcaacagggagaggatc
acattttgtcacctgcccttccagagtaaatggctgtacattggcacagagaaaggaaac
atccacatcgtcaacattgagtccttcacactctcaggctacgttatcatgtggaacaaa
gccatcgaactgtcctccaagtcacaccctgggcctgtggtccacatcagtgataaccct
atagacgagggaaagattttgattggatttgaatgtgggagtgttgtgttgtgggacctg
aaatgcaaaaaagctgactaccgctacaattatgatgaggctatccactcagtagcctgg
caccatgagggcaaacagttcacctgcagccactcagatggaactctgactacatggaac
gtacgcgtccctgccaagcctacaatcaccatcacaccacacggtaagcagcccaaggat
ggaaagaagccagaaccatgcaaacctatccttaaagtggagtacaaaacgacaagagct
gggaatgccttcgtgatcatgtctggaggcctgtcctatgacacagggtgcaggagagcc
tgtctgacagtgatgcatgggaagagtactgccctcctggagatggactatcccatcgtg
gacttcctcacgctctgcgaaacaccatatccaaatgatttccaggatccttatgccgta
gttgtccttttggaaaaggatttagttgtcatcgaccttagacaaattggatacccaata
tttgagaacccatactctctgtcgatccacaagtctccagtgacgtgcgtagaatatttt
gctgactgccctcctgaactcatacctgcactttactctgttgcctcctggcaaaagaga
ccgggttacagtaagaaggaatggcccataagtggtggtaactggggccaaggcacacta
agctaccctgagatcattgtcactggacatgctgatggatcaatcaatttttgggatgct
tctgcaataatgctccaagtactgtacaagctgaagactgccaaggtgtttgagaaggct
ctaaagggcggtaaggaggagaagccgagcacggagatagtggatgaggatccctacgcc
atccagaccttgtcgtggtgcccagagagcaggatgctgtgtgtggctggagtctccgcc
cacgtcatcatctataggttcagcaaacaggaaataaccactgaggtggtgcagctgttg
gaggtgcgtatgcagtgtgagctggatgttgtggattctccagacactgcaggagagcgt
cctcctaccccagtacactactcctgcccaacccaggagggagacccccctgagactcag
ccctccacaactgatgacgggccccgggataatgtaccatgcctcaaggtccggagctcc
cctctgaagcagtctcctggttaccaggtggagctggtcattcagctggtctgggtttgt
ggggagccgccccagcagatcaccagcctggctgtcaactccttatacggacttgtggtg
tttggcaacagcaatggtctggctgtagtggactaccttcagaagagcctcctcctgaac
atgggcacgtcagagctgtacagtccctcagacccctaccagagacagcctcggtcgcct
cgcaagaaacgacatccatctggagctctcagtgataacaacaatggaaacaacgctttg
gaagagaaaagcaacaaatcaccaacgtcaggctctacgtcacccaccaattcagacgat
gaacacaaacagaaaaggttcatacagaaggtgaagtccaaaagcaggcggttttccaag
acggttgccaatgactttgccaagatgtcaaggaaaatttgctcacctacagagcaaaag
acagacctggagaagagggtacgacgccagcactctctcccgtataagaagcgcttttgt
tgtgtgaaggagggcaaggagcccaggaagtctctctcccaacaaaggactctctcagtc
ccttacctcaatgccaaggacagtttgttcagccgctcgaggagctccagtgtgaccagt
atagagcgggagtcccgcgaggccatctcctccttccacttcagtgagagtttccccagg
aagacagacagcagtggcagccccagcctgtgggtgggcactacccagggcactgttctg
ggtctggctctaagcctgccacccacaggggacctgaggcttcagcaacctgtcagagta
tcatcttgtggtactctggtcagacttaaaggaggtatcctgaccatggctttccttgac
tcccttggggcggtcctccccccttcctacgagccgtggtcggagcccaaccctccggac
gaggagaaggagaaggcgaggcggcgcaggccggcctctccaccccccacccaggagggt
caggacagccagtacgctgtggtgtgctcagagaaacaggccaaggtggtgggcctgccc
tcccagtcctgcttcttcaaacacaacatcacagagagctcctttgtgctgagagctgac
gtggtgcagatggctgcaggactctgcctcgcctgcttctgtgctaacggacacatcatg
gctctgagtctacccagtctcagaccactcctggatgtgaactaccttcccctgacagac
atgaggatagcccggaccttctgcttctccaacctgggccaggccatgtacctcacctcc
cccaccgagatacagagaatcacatacagccaggagacctgcgacaatctacaggaaatg
atgggagagttgtttacaccgatcgagacacctgaggctcctaacagaggtttcttcaag
ggcttgtttgggggaggagctcagtccctggatagagaagacctgtttggtgagacggcg
gcgggtaaggcgtctcgtagcctggcacagcacattcctgggccccagggcatggagggt
atgaagggagcagcctctggggtggtgggggacctggcccgtgcccggatagccctggac
gagagggggcagaaactgggagagctggaggacagaaccgcagccatgatgtccagcgcg
gactccttctctaaacacgctcacgatatgaagctgaagtacaaagataagaagtggtat
cagctctga
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