Salvelinus fontinalis (brook trout): 129812007
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Entry
129812007 CDS
T11136
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
KO
K11274
chromosome transmission fidelity protein 4
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129812007 (wdhd1)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
129812007 (wdhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Beta-prop_WDR5
Ctf4_C
WD40
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_Prp19
HMG_WDHD1
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_HPS5
EIF3I
WDR55
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
HMG_box
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Tricorn_2nd
Beta-prop_Nup120_160
PROPPIN
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
129812007
NCBI-ProteinID:
XP_055719855
LinkDB
All DBs
Position
15:complement(42358938..42403716)
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AA seq
1131 aa
AA seq
DB search
MPCERKPMRYGHSEGHTDVCFDDTGKYIVTCGSDGDVRIWESLDDDDPKSINVGEKAYSL
ALKNGKLVTAASNNTVQIHTFPEGDPDGILTRFTTNATHVTYNSSGSRVAAGSSDFMVKV
VEMSDSSQQKTLRGHVAPVLSVTFDPKDEFLASASCDGTVAVWKIEEQTQVTSWPLLQKS
NDVINAKSLCRLAWQPKAAKLLAVPVETTVQLYQRDSWAHVGTLSDDLGTQAINVVAWSP
CGKFLATGSIGGLLTVWDVESKLCVERQTHEKGYTVCGLAWHPSGGQIAYTDTEGCLGVL
DGLSSSSSSSSSTTAAKSTKQAPASYDDLFDDDDDRPMDEGIGEGALSPAKNPGDEDDDD
DLMPATGRARNRSAFLDDENSLDTGSLKLGLDKFVDDDDAGSAIVPPVAVAAPLRPVYDG
PMPTPPQKAFQPGSTPAHLMHRFMMWNSVGIVRGYNDDQDNAIDVEFHDTAVHHAMHLTN
TLGHTVADLSQEAVLLACPGTDELASKLQCLHFSSWDTNKEWMVDLPKGEDVRALCLGQG
WAAAATSALMLRLFSIGGVQRELFSLPGPVVCMAGHGEQLLVVYHRGTGFDGEQALGVQL
LQFGHKRRQVIHGEPLPLSRKSHLSWLGFTAEGTPCYIDSEGVVRLLNRSLGNMWTPVCN
TRDNCKGKSDHYWVVGVHENPQQLRCIPCKGSRYPPTLPRPAVAVLPFKLPFCQTTTEKG
QMEEQYWRSVLLHNHYGFLSSSGYEIDEEGQSQAQKEQQELLMKMFALSCKLEREFRCVE
LAELMTQNVVTLAIRYASRSRRMALAQRLSDLALEKANQLQGEEPQEEEEEEPLQYTRRN
TGYGQSSSEMGADRQHSSHRQVSEEEVDEEEGQEEHIDDGDVAESKRRGLNPLSKGTAAS
PEKPSPKPVSKEGRVNPFKVSSGLGRPGSAGGQHRVTNVLDSMMSSSRKPTALLSSSAGK
LNKTPVLKPLPPRPKTKTQSTLLHMNAPKAANKKAAEEREPAVCRLKQTEAPPPASPAEN
VENKKPKTGFQMWLEENRRIILADNPDLEETDVIKEAMGRFRTLSADDRLSWTERAKGPS
GDVADMKKRKRGEEESRGDENGQSEADETSAKKKKPLDTSAKLSAFAFNKN
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtgaaagaaagccaatgcgctacggccactcggagggacacactgatgtttgc
ttcgatgacactggaaagtatatagtcacttgtggaagtgatggggatgtgagaatatgg
gagagtctggatgatgacgatcccaagtccatcaacgtgggggagaaggcctattcttta
gccttgaagaatgggaagctggtcacagcagcctccaacaacacagtacaaatccacacg
ttccctgagggtgacccagatggcatcctcacccgctttaccaccaacgccacccacgtc
acctacaacagcagcggctccagagtcgctgccggatccagtgacttcatggtgaaggta
gtggagatgtccgacagcagtcagcagaagaccctgcggggacacgttgcccccgtcctc
agtgtcacctttgaccccaaggatgagttcctggcctctgctagctgtgatggaactgta
gctgtgtggaagattgaggagcagactcaggtgaccagctggccgctgctgcagaagtcc
aatgatgtcatcaatgccaagtccctgtgccgactggcctggcagcccaaggccgctaag
ctcctggccgttcccgtggagacaacggtgcagctgtaccagagagactcctgggcccac
gtgggcacactctccgatgaccttggcacacaggcaataaatgtcgtggcatggtcgccc
tgtgggaagttcttggctacagggagcatcgggggtttgctgacggtctgggacgtggag
agcaagttgtgtgtggaaaggcagacgcatgagaagggctacaccgtgtgtggactggct
tggcatccctcgggcggtcaaatagcctacaccgacacagagggctgtcttggcgtgctg
gatgggctctcctcttcttcatcctcttcttcctccactacggctgcaaagagtaccaag
caggctccagccagctacgacgatcttttcgacgacgacgacgacagacccatggacgag
ggtatcggcgagggcgccctttcacccgccaagaaccccggggacgaggacgatgacgac
gacctcatgcctgccacggggcgagcacggaacaggagtgccttcctcgacgacgagaac
tcactggacacaggctcgctcaaactggggctggataagtttgttgatgacgacgacgcg
ggcagcgccatagtgccccccgttgctgtggctgctcccctccggcccgtctatgacggg
ccaatgcccaccccgccacagaaggctttccagccaggatccaccccagcacacctcatg
caccgcttcatgatgtggaactcggtgggaatcgtgcgcggctacaatgacgaccaggac
aacgccattgacgtggagttccacgacacagccgtgcaccatgccatgcacctcaccaat
accctgggccacaccgtggcagacctctcccaggaggccgtgctgctcgcctgccccggc
accgacgagctcgccagtaagctccagtgccttcacttctcatcgtgggataccaacaag
gagtggatggtggatctgcccaagggggaggacgtgcgggccctatgcctgggccagggc
tgggcggcggctgccaccagtgccctcatgttgcgcctcttctccatcggaggggtgcag
agggagctgttcagcctgcccggacccgtggtctgcatggctgggcacggggagcaactg
ctcgtcgtctaccaccgaggcacagggtttgacggagaacaggccctaggggtccagctg
ctgcagtttggacacaagagacggcaggtcatccacggggagcccctccccctctcccgc
aaatctcacctatcatggttaggcttcacagccgagggaaccccatgctacatcgactct
gagggcgtggtgcgcctgctaaaccgctccttgggaaacatgtggacacctgtgtgtaac
accagggacaactgcaagggcaagtcagaccactactgggtggtgggagtgcatgagaac
ccccagcagctcaggtgtatcccatgtaaagggtcccggtatccccccacgttgcccagg
cctgctgtggccgtccttcccttcaagctgcccttctgtcagaccaccacagagaagggc
cagatggaggagcagtactggcgctcagtgctcctccacaaccactacggcttcctgtcg
tccagcggctacgagatagacgaggaaggccagagccaggcccagaaagaacagcaggag
ctgctcatgaagatgtttgccctgtcgtgtaaactggagagggagttccgctgcgtggag
ctggccgagctgatgacccagaacgtagtgaccctggccatccgctacgcctcgcggtcc
cgccgcatggccctggcccagcgcctcagcgatctggccctggagaaggccaatcagctg
cagggggaggagccccaggaggaggaagaggaggagccactccagtacaccagacggaac
actgggtacggccagagcagcagtgagatgggtgcggatcgccaacacagcagccacaga
caagtatcggaggaagaggtggatgaagaggagggtcaggaagaacatatagatgacggg
gatgtagcggagagcaaaagacgaggtctaaatcccttgtcgaaagggactgctgcatca
cctgagaaaccttctcccaaacccgtaagcaaagaaggacgtgtgaaccctttcaaggtg
agcagcgggttagggaggccgggttcggcggggggtcagcacagggtgacaaacgtcctg
gacagcatgatgtcgtccagcaggaagcccactgctctgctgagcagctccgcggggaaa
ctgaacaaaacacctgtgctcaagcctcttcctcccagacccaagaccaagacccagtct
acactgctgcacatgaacgctcccaaagcagccaataagaaagcagcagaggagcgggag
ccggcagtgtgtaggctgaaacagacggaggcaccgcctccagcctcaccagcagaaaat
gttgagaacaagaagcccaagacgggcttccagatgtggctggaggagaataggaggatc
atcctggctgacaacccagatctggaggagacggatgtcatcaaggaggccatgggccga
ttcaggaccctgtctgcagacgaccggctgtcctggacagagcgggcgaaaggaccgtct
ggagacgtggcggatatgaaaaaacgaaagagaggggaagaagagagcaggggagacgag
aacggacagagtgaggcagacgagaccagcgccaaaaagaaaaagcccttagacacctca
gccaagctctcagcatttgccttcaataaaaattaa
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