Salvelinus fontinalis (brook trout): 129812029
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Entry
129812029 CDS
T11136
Symbol
irf2bpl
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129812029 (irf2bpl)
04121 Ubiquitin system [BR:
sfon04121
]
129812029 (irf2bpl)
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
129812029 (irf2bpl)
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Atypical E3
129812029 (irf2bpl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
129812029
NCBI-ProteinID:
XP_055719890
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All DBs
Position
15:43357776..43361426
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AA seq
669 aa
AA seq
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MSSAQVSSSRRQSCYLCDLPRMPWAMIWDFTEAVCRGCVNYEGADRIEFVIETARHLKRA
HGFQGGRSPGPPPPPTVKTQSAISAKETVQISHVDGPSKQQQSGMDRYSLSAERPRFDYS
SIGAHASRLPNGMSGPNGFPKPDDGPPELNRQSPNSRRSHGLAAVPGQMNVPPNLLPQTM
LNGPSSATAIAPHSLSSRPPPPSIVGPSLSMGAQSMSEQGKRPGSVSSTDQERDLKEKQR
NAEALAELSESLRNRNEDWGNKPKIVRDTLVTLSNSSPFDVRFKKDHSLVGRVFAFDAVS
KPGMDYELKIFVEYPSGSGNIFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEKKHGSG
DWRLLGDLLPESVRFFKEGLGVEMLPQPYIDASCPLLPTALVNIPRALPSTSAPRTGVRK
RKASPEPDSVESALKLSEQEQQRQQWMASQSEALKLTMASGSFGASHGGPPPLGPGHSVH
SSRATPPESAPQNGQSPMAALMSVADTLGNAHSPKDNNSVHSTTSTRHNSSSPVSPASVS
GQRRLASRNGELNLSGTPSQSNAHSGMDQVHSQNIPDSPMANNGPLCCTICHERLEDTHF
VQCPSVPNHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGD
VKVKKERDP
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcacaagtatcttcatctcggagacagtcatgttacctgtgcgatttaccc
cgtatgccgtgggctatgatttgggattttacggaggcagtgtgcaggggttgtgtgaat
tatgagggtgcggatcggatcgagtttgttatcgaaactgcacgccacctcaaacgagct
catggtttccaaggggggagatcccccggtccaccaccgccgcccacagtaaaaacacag
tcggcaatatcagccaaggagacggtgcaaatcagccatgtggatggaccctctaaacaa
caacagtcggggatggaccgctactctctgagtgcggaaagacctcgctttgactactcc
agtattggcgcccatgccagcagacttcccaatggaatgagcggtccaaatgggttcccc
aaaccggacgatggtcccccagaactgaaccgacagagcccgaactcccgtcggagccac
ggtctcgctgcggtcccaggacaaatgaacgttccccccaaccttctcccacagaccatg
ttgaatggaccctcctcggcaacagccatagccccgcatagcctgtccagccgcccccct
cctccatccattgtgggaccctctttgtccatgggcgctcagtccatgtcagaacaaggt
aaacgaccaggttctgtgtcaagcactgaccaagagagagatctgaaagagaaacagcgt
aatgcggaggctttggctgagctcagtgaaagtttaaggaacagaaacgaagactgggga
aacaaacccaaaatagtaagggacactttggttactctttcaaacagctccccgtttgat
gtgagatttaaaaaggatcattcactcgtgggcagggtgtttgctttcgatgcagtgtca
aagcctggaatggactatgaattgaaaatatttgtcgagtacccaagtggatctggtaat
atattttccagcgcatcaggggtggccaaacaaatgtatcaggactgcatgaaagacttt
ggcagagggctttcctcgggctttaaatatttggagtatgagaaaaaacatggttcgggg
gactggcgactcctgggtgatttgttgcccgaatccgtccgattctttaaagaggggctg
ggggttgaaatgttgcctcagccctacatcgatgccagctgcccattgctgcccactgct
ttggtcaacatccctcgtgcattgccatctacgagtgcaccgaggactggcgtgcgtaag
cgtaaagcctccccagaacctgactctgtagagagtgcgctgaaactatctgaacaggaa
caacagaggcagcagtggatggccagccagagcgaggcgttaaaactgaccatggcatcc
ggatcattcggtgcctcacacgggggacctccgccgcttggccctggccattctgttcac
tcaagtcgcgccacaccccctgaatctgcgccccagaatggacagtctccaatggccgcg
ctcatgtctgtcgcggacacgttgggcaatgcgcactctccgaaggacaacaactcagtt
cactctacaacatccaccaggcataacagcagcagcccagtctccccagcctctgtttct
gggcagaggcgtttggcttcccgtaacggagagctcaatctgtccgggactccctctcag
tccaatgcgcattctggcatggatcaggtccactcgcaaaacattccagattctcccatg
gcaaacaacggacctctgtgttgtaccatttgtcacgaacgtttagaggatacccatttc
gttcagtgtccgtcagttcccaaccacaaattctgtttcccttgttctcgagagagcatc
aaagcgcagggagcaactggcgaggtgtattgtcctagcggagagaaatgccccctggta
ggttctaatgtgccttgggcgttcatgcaaggtgagatagcaacaatattagctggggac
gttaaggtaaaaaaggagagagacccatag
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