Salvelinus fontinalis (brook trout): 129812057
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Entry
129812057 CDS
T11136
Symbol
syne3
Name
(RefSeq) nesprin-3 isoform X1
KO
K21761
nesprin-3
Organism
sfon
Salvelinus fontinalis (brook trout)
Pathway
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129812057 (syne3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129812057 (syne3)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
129812057 (syne3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin_SYNE1_2
KASH
SYNE3
SR_desmoplakin_3
YAcAr
Spectrin_SYNE1
Motif
Other DBs
NCBI-GeneID:
129812057
NCBI-ProteinID:
XP_055719941
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All DBs
Position
15:complement(45864116..45909279)
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AA seq
1294 aa
AA seq
DB search
MTQQEQQEFIDSLEAAQSWIHVVQERLRVNDNTQGPRAALQARLRETEKIHESEHEGRVK
VDMVLVAAEVLLQNGDQETRSKTHARLKELKASWEETCTFIIHCHSRIEWVWLHWSEYLK
AHEEVEMWLVRMHRSLEPEVELQLGVKEKLWQVDHQHVLLSDVQSQALLLERLLDEAAAL
HNRTQDPSVDQEAQERLQEAYNSIRDRAEERLSVLQKIAEEHQIYQSFVLKFQAWLVSKA
KELNTLTETEDTAENNLQALQTLDDSVASEERTLQHIEGMAEVVRANTSPGGVEVVEEEV
EELRLAWQRLRQSLCEAGEGLRSSRDSQSQYQSRCQRLGEDIAQLQALLHRLTRDLETAR
EGDRTEEQMVGQWRKYTSVRNTLSAEESQVENLKAQLKELFRFSQDSRHLSDDVLAVVKE
HQSVKCLAMKLCVESETGLRLVLQDPLHDFSQWSQLVSQVLEASAEVSEFSHIALLVQNI
ERLMMQSLQLQERLSLLQVKRDLLASVFGSDRAESLLTELNAAVRNRELLHSQLLQRKGR
LQGLISRTKDFGDAYESIRSKLTLLRDRLISADILQPDILAKKSQSDQLRGIKKDLEDCE
AHITALETLVSSSSTNQTRSERLYGDWRNLYKAVRVKGNESEESIREHESFHESLLNVEK
WLMIMRQKLESYRSSAGEWSVDNRQHEAERALGEFPEKELQLHQTEVKGQGVLKRTSEEG
RVHILRDMKRLRESWMALHDLSLNLFRLLNGHSSSEDHNLDIQRVRGQAGELTGPARELF
HGEGGDLIKGRGSSNRREGAPEGSPGEDHGVWVSQSYGSGSGRGGRTGSGARMEQSEGAS
FRAEEGVWVEGRFEGSVEDMDLSEHGERQGSGQQTLGQQLGPMALSQGSSRRPGQGSGVE
SSGNCREKGGGEHSFGVEEVDSIAWRGGYGQGGERETRGGTTGINSSGHTGGRSPQCGVV
GGSGSRSSGVVGGSGFTGSGVMEGSGSRSSGVVVVGASGSSSSGRTEEWVDEQRSRGVAD
PVVMEVDVGLGLGHSQGSRSSYGEGTSEMGDQSGSGGGYLRHRGSFTLIKTKMEDPVMEQ
GFARETSGGLQSSSQQTTAGPGSALSAAEYEDRRRMFEAWLQKENDTLSGILNTKGPLST
RELKISQNTLKTLRSSVGWGQEQFQLLLMSGAAASGAGDGADHWAEDVGMEEIRYRWMLY
KSKLKDVGDLKALLNVQGASVAGQEEHTRTAKGKTPGLLYRVCRVALPLWLLLLALLLFA
FFLPWMDEGSSCSLSNNFARSFNIMLRYDGPPPT
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgactcagcaggagcagcaggagtttattgatagcctggaggcagctcagtcctggata
catgtcgttcaggagaggctccgggtcaatgacaacacccagggcccccgagcagccctg
caggccaggctcagagagacagagaaaatccacgagtctgagcatgagggtcgcgtgaag
gtggacatggtgctggtggctgccgaggtcttactgcagaacggagaccaggagaccagg
agcaaaacccacgccagactcaaagagctcaaagcatcatgggaggagacctgcaccttc
ataatccactgccacagccggatagagtgggtgtggctgcactggagtgagtacctgaag
gcgcacgaggaggttgagatgtggctggtccgcatgcaccgcagtctggagccggaggtg
gaactacagctgggggtgaaggagaaactgtggcaggtggaccaccagcatgtcttgctg
agtgacgtgcagagccaggcactgctgttggagaggctgttggatgaggctgcagcgctg
cacaaccgtacccaggaccccagtgtggaccaggaggcacaggagcgactgcaagaggca
tacaacagcatacgggacagggctgaggagaggctgtccgtgctgcagaagatagctgaa
gagcaccagatttaccagagcttcgtcctaaagttccaggcctggctggtgtccaaggct
aaggagctgaacacacttacagagacagaggacacagccgagaacaatctccaagcccta
cagaccctggacgacagtgtggccagtgaggagcggacgctgcagcacatcgagggcatg
gcagaggtggtgcgggccaacacgtcgcccgggggggtggaggtggtggaggaggaggtg
gaggagcttcgtctggcctggcagaggctccgacagagcctgtgtgaggctggggaaggc
ctgaggagcagccgagactctcagagccagtaccagagccgctgccagcgcctgggggag
gacatcgcgcagctccaggccctgcttcacagactgaccagagacctggagacagccagg
gagggagacaggaccgaggaacagatggttgggcagtggaggaagtacacgagtgtccgg
aatactctgtcagcagaggaatcccaggtggagaacctcaaggcccagcttaaagaacta
ttccgcttttcccaagattcccggcatctctctgacgacgtcctggctgtggtgaaggag
caccagagtgtgaagtgtctcgcaatgaagctgtgtgtggagtcagagaccgggctgaga
ctggtgctgcaggaccctctgcatgacttctctcagtggagccagctggtctctcaggtg
ctggaggcctcagcagaggtgtctgagttctcccacatcgccttgctagtgcagaacatc
gagaggttgatgatgcaaagtctgcagctacaagagcggttgagtctgctgcaggtgaag
agagatctgctggcttcagtgtttggctctgaccgagcagagagtctactgacggagctc
aacgccgccgtgaggaaccgagagctactgcacagccagcttctgcagaggaagggaaga
ctgcagggtttgatctcgaggacgaaggactttggcgacgcctacgagtcaatcaggagc
aagctgaccctcctgagagacagactgatctcagcagacatcctccaaccagacattctg
gccaagaagagccagtcagaccagctacgggggatcaagaaggacttggaggactgtgag
gcccacatcacagctctggagactctggtgtcatccagctccactaaccagacccggtct
gagaggctgtatggggactggaggaacctatacaaggcagtccgggtgaaggggaacgag
agtgaggagagcatcagggagcacgagagtttccacgagagcctgctgaatgtagagaag
tggctgatgattatgaggcagaagctggagtcctaccgcagttctgctggggagtggagc
gtggacaacagacagcatgaagctgagagggcactaggtgagttcccagagaaggagctg
cagctgcaccagacagaggtgaagggccagggggtgctgaagaggacctctgaggaggga
cgagtgcacatcctcagggacatgaagcgcctgagagagtcctggatggccctgcatgac
ctcagcctcaacctcttcaggctactgaatggacacagctcctctgaggaccataactta
gacatccagagggtgagaggtcaggctggggagttgacaggcccagctagggagctcttt
catggggagggaggagacctgatcaaaggaagaggctccagcaacaggagggagggtgct
ccagagggatccccaggagaggaccatggtgtctgggtctctcagagctatggatcaggg
tctgggagagggggaagaacagggtcaggggcaaggatggagcaaagcgaaggggcaagt
tttagagcagaagagggtgtgtgggtcgagggaaggttcgagggcagtgtggaggatatg
gatctctctgaacatggggagagacagggcagtggtcaacagactctgggtcaacaactg
ggtccaatggcgttaagccaaggaagcagtcggagaccgggacagggcagtggggttgaa
agcagtggcaattgcagggagaagggtggcggtgagcacagctttggtgttgaggaggtg
gactccattgcctggagagggggatatggtcagggaggagagcgggagaccagaggggga
accacagggataaactcctcaggccacacaggaggcagaagcccccagtgtggagtggtg
gggggctctgggtccaggagtagcggagtggtggggggttctggttttacaggcagcggt
gtgatggagggatcaggctctaggagtagcggagtggtggtagtcggggcgtctgggtcc
agcagtagcgggcggacagaggagtgggtggatgagcagaggtccagaggtgtggctgac
cctgtagtcatggaggtagatgtggggttagggcttggtcatagtcagggcagcagaagc
agctatggagagggaacaagtgaaatgggagaccagagtggaagtggagggggatacctg
cgacacagagggtccttcaccctgatcaagacgaagatggaggatccagtcatggagcaa
ggctttgctagagaaacttctggagggctacagagctcaagtcaacaaaccacggcaggt
ccagggtcagctctgagtgcagcggagtacgaggacaggaggaggatgtttgaggcctgg
ctacagaaggaaaacgatactctttcagggattctcaacaccaagggaccgctgagcacc
agagaactcaagatcagccagaacacactcaagactttgcggtccagtgtgggctggggt
caggagcagttccagctactgctgatgtctggggcggctgcatccggagctggggacggg
gctgaccattgggctgaggatgtgggtatggaggagatacgttatcgctggatgctctac
aagtccaaattgaaggatgtaggagacctcaaggctctgttgaatgtccagggtgcaagt
gttgctggacaggaggaacacaccaggacagctaaggggaagactccaggcctgctgtac
cgtgtgtgtcgggtggccctgcccctctggctcctgctgttggccttactcctcttcgcc
ttcttcctgccctggatggacgaaggctccagctgctctctgtccaacaactttgcccgc
tccttcaacatcatgctacgctacgacggacctccacccacatag
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