Salvelinus fontinalis (brook trout): 129812069
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Entry
129812069 CDS
T11136
Name
(RefSeq) synaptosomal-associated protein 23-like isoform X1
KO
K08508
synaptosomal-associated protein 23
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
129812069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129812069
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129812069
Membrane trafficking [BR:
sfon04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-23
129812069
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129812069
Exosomal proteins of other body fluids (saliva and urine)
129812069
Exosomal proteins of colorectal cancer cells
129812069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP-25
DUF5089
V-SNARE_C
COG6_N
Exonuc_VII_L
Sec20
Use1
Motif
Other DBs
NCBI-GeneID:
129812069
NCBI-ProteinID:
XP_055719981
LinkDB
All DBs
Position
15:46810639..46859051
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AA seq
244 aa
AA seq
DB search
MEWNGGKMNRPQSVELGVTGGTSNFDSSKMADMSVEDITMRANQVTDESLESTRRMLQMA
EESRQTGVNTIEMLDQQGEQLRRAEEGMDQINQDMRQAEKNLTDLSKCCGLCVCPCDRVT
SIEHDSKYKRTWGMGDRSSAGGGEGVDGSVVSTQPSGIRNGQANQQQSMGGPYIKRITND
AREDEMEENLDQVGSIIGNLKNMAMDMGSEIDKQNKHIDRITDKADMNKARIDEANQRAN
KLIK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaacggtggaaagatgaataggcctcagagtgtagagcttggtgtgacagga
ggaacctccaactttgacagcagcaaaatggcagacatgtcagtggaagacatcaccatg
agggccaaccaagtgaccgatgagtccttggagagcaccaggcggatgctacagatggct
gaggagagcaggcagactggtgtcaacaccattgaaatgctggaccaacagggggagcaa
ctgcggcgtgcggaggagggtatggaccagatcaaccaggatatgagacaggctgagaag
aacctgactgacctgtccaagtgctgtggcctctgtgtctgcccctgtgacagggtgacg
tccatagagcatgactctaagtacaagcgtacctggggaatgggtgatagaagcagtgca
ggtggaggagagggagtggacggctcggtggtgtccactcaaccatcaggcatccgtaat
ggacaggccaaccagcaacagtccatggggggaccttacatcaagaggataaccaacgat
gctcgcgaggatgagatggaggagaatctggaccaggtgggcagcatcataggcaacctg
aagaacatggccatggacatgggctctgagatagacaagcagaacaaacatatcgaccgc
atcacagataaggcggacatgaacaaagcacgtatcgacgaagccaaccagcgagctaac
aagctcatcaagtag
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integrated database retrieval system
