Salvelinus fontinalis (brook trout): 129812072
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Entry
129812072 CDS
T11136
Symbol
cdan1
Name
(RefSeq) codanin-1
KO
K19531
codanin-1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129812072 (cdan1)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
129812072 (cdan1)
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Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
SPATA2_PUB-like
Motif
Other DBs
NCBI-GeneID:
129812072
NCBI-ProteinID:
XP_055719988
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Position
15:complement(46986025..47004855)
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AA seq
1420 aa
AA seq
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MLSYFWSAPQGNAVATFARLLPFWSAPNSKQQAECQTAPAQTRMAALLESLLQKEVEAIK
AVEWLKHDGDSDSLAWCKPLKIERQEFVPFLLNFLREQSCSALTHGPATPAKTPSHPRVS
QPSQQGPGFSSERRGGCRSTGPGTGPRSASRVQLFSSTPSLSPGAEWDATHPPSGSHYLG
EISALSSPSFSSARSPAPASTSRHTPSERRSDQRASLGDFMPSPPELQHQHSLSLGVQPP
RGRRRSAGMGRQGGGRGVFQTEEVGPGRSEGGGRKGRGGGANKMGDTAVSPPTTTLVQLN
LTNLEDFPPMGMSHASPPLHTKPSRRINPTPVSAERPHSRPKTCFTSTPFSTRPSSPPPV
PEAVTGAIEGSITGALNVGSPPLSLQEERELLKRVKCKRAQQVGSPLPTSLDPCTPTQSV
LRPVSGSKMTPVIQGLCPDPSKVTLTSELDLLADLYCTCISENLVPNVFLELFFVLQLLT
SRTPAVTEEEDKDLSMGTLDVLERGYLSKVHNCVYFSVRVLENQFELVSHLDKDTLRLLA
ENERVSCFSPSLRNRLTLAQDPSTAKVSPSVDTFIHSVPFQPATDNRSNFSSDKAFHTFK
KQRDIFYEVLREWEDFHKEPKWEFEVELGSRVRGMVSQLNSTGNHSHFARLFLKQLVQMC
KGPRALGSPGDTPDADLLGMLGADSLGRLKRLEERLIQPQGILGPCPPPAFPGHQEFFRD
FLKTASCCQLNQHLKDSLCQQLLQLDEVSVLAPVVSSTEGEGDMEQQDEKQRFSSVLLLA
RLLAKFLGYISFLPYQTSERPSREIQEAAATLRSKSMSVLDVCAVLRSCVRRRRTILTVP
WLVEFLSMLDFTGPFLLCYRTVLGLLLSLYRRMVLSREGEVCYLNQLLMVAVLGWLFQIP
VIPEELFFSADFTVAVELEESQTNVQGLDCLPLVDQQLLYTCCPFLGEFRKLLAAFVAGS
SARGGGLIRKITPTSAELRGTPTTTRSQQKLQVDLEQAFFHNQPPSLRRTVEFVAERVGS
NCVKHMKVTLVCELVCGGERLLREGLISPGANPLILNDSICAQLCDGGQEALERATRFCS
EKGPEAIRVLLPDETSPAVLTTSENITKRLATEKACSWLTSNITALVKREWKTKFDRVMK
SLPSPEASGVEGSGSGLGAKTGAAAVTQEQSRTPKRDNGKEEAATSCPPDCPHSAPLPSD
VLVEIKEVLSIAVGPRSEKEVLTCLQLNALLGKVGDALSCKKFSFPMPEQMLIRCTVLLA
CKLVSGELPMVFPQEECGRTVSPGRTVSPGPVLSDSPVQRVRCSIKALLEQLILLWGRDY
CSSAPLHLLFTEMTLSAVLMASDSQWDNFLFLVRQLVERGILGEKEVVSHWRKLSQLPWP
TEFIEKIQQQSSSTTALPPPELQNHMDMLQVSPQPVEGAN
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcctatttctggagcgcgccccagggcaatgcggtagcaacattcgcgcgcctg
ctcccattctggtccgcccccaactccaagcagcaggcagagtgccagacagcgcctgct
cagaccagaatggcggctcttttggaatcgctgctgcagaaggaagtggaagctatcaag
gccgtcgaatggctaaaacacgacggggacagtgacagcttggcatggtgtaagccactg
aagattgaaagacaggagtttgttcctttcctgttgaacttcctgcgagagcagagctgc
tccgccctcacccatggccctgccacacccgccaagacccccagccaccccagggtctcc
cagccctctcagcaggggccaggcttctccagtgagcgcagggggggctgcagatctacc
ggacctggaaccggtcctcgtagcgccagccgtgtacagctattctcctccactccctcc
ctgtcccctggggctgagtgggatgctacccaccccccatctggctcccactacctgggt
gagatcagtgccctcagtagtccttccttcagctcagccaggagccctgctccagcctcc
acctccaggcacactccctcagagcgccgctccgaccagagagccagtttgggggatttc
atgccgtcacctccagagctccagcaccaacacagtctcagcctgggggtccagccgccg
cgtggccgcaggaggagtgccgggatgggaaggcagggtggggggcgtggtgtgttccag
actgaggaggtggggccaggaagatctgagggtggtgggaggaagggaaggggaggaggg
gctaataaaatgggtgacactgctgtgtcacctccgacgacaacgctggtccagctgaac
ttaaccaatctggaagacttcccacctatggggatgtcgcatgcatcaccaccactgcat
acaaaaccatctcggaggatcaacccaaccccagtcagtgcagagcggccgcactccaga
ccgaagacctgtttcacttccaccccgttcagcaccaggccctccagccctcccccagtc
ccagaggcagtcactggtgccatcgaagggagcatcactggggccctgaatgtgggcagc
ccccctctcagtctgcaggaggagagagaactgctaaagagagtgaagtgtaaacgagcc
cagcaggtgggctcccctctacccacctctttggacccctgtacccctacccagtcagtg
ctccggccggtatcaggctccaaaatgacacctgtcatccaggggttgtgtcctgacccc
tctaaagtcaccttgacctctgaactggaccttctggctgacctctactgcacttgcatc
tctgagaacctagttcccaacgtgttcctggagctgttctttgtgctgcagcttctgaca
tctagaacaccggccgtcacagaggaagaggacaaggatctaagtatggggacgttagat
gtcctggaaagaggctacctcagcaaggtgcacaactgtgtctacttctctgtcagggtg
ctggagaatcagtttgagttggtgtctcacctggacaaggacaccctgcgtctcttggct
gagaacgagagggtgagctgcttctctccatccctgaggaacagactgaccctggcccag
gaccccagcacagccaaggtctcgccctctgtggacaccttcatccactctgtcccgttc
cagcctgccactgacaaccgctccaacttcagcagtgacaaggccttccacaccttcaag
aagcagagggatattttctacgaggtgctgcgagagtgggaagacttccacaaggaacct
aaatgggagtttgaagttgaactaggcagtagggtcagaggaatggtgagtcaactgaac
tccactggaaaccactcccatttcgccagactcttcctcaagcagttggtgcagatgtgt
aaaggtccccgtgctctgggctccccgggcgacacccccgacgcggacctgctaggcatg
ctgggagcagacagcctggggcgtctaaagcgtctggaggagcgcctgatccagccccaa
ggcattctgggaccctgtcctccacctgccttcccaggacaccaggagttcttcagggac
ttcctaaagaccgcaagctgctgccagctgaaccagcacctgaaggacagtctgtgtcag
cagctcctccagctggacgaggtgtccgtcctggctcctgtggtctccagtaccgagggc
gagggagacatggaacagcaagacgagaagcagcgtttctcctccgtcctgctgttggct
cgtctcctagctaagttcctgggttatatctccttcctgccgtaccagacctctgagagg
ccctccagggagatacaggaggctgccgccaccctccgcagcaagagtatgtctgtgctg
gatgtgtgtgcggtcctgcgtagctgtgttcgtaggagacggaccatcctgactgtgccc
tggctggtggagttcctctccatgctggacttcaccggtcccttcctcctctgctacagg
accgttctgggactgctgctcagcctatacaggcggatggtgctgtccagagaaggagag
gtgtgttacctgaatcagcttctcatggtggctgttcttggctggctattccagatccca
gtgatcccggaggagcttttcttcagtgctgatttcactgtagctgtagagctagaggag
agccagaccaacgtccagggacttgactgtctccccctagtggaccaacagctcctctac
acctgctgtcctttcctgggtgagttccgtaagctcctcgctgcctttgtggccggtagc
tctgccaggggtggaggcctcatccgtaaaatcacccctacctctgctgagctgagagga
acccccaccaccaccaggtcacagcagaaactacaggtggatttggagcaagccttcttc
cataaccagcctccatctctcagacgaacggtggagtttgtagctgagagggtgggatcc
aactgtgtcaaacacatgaaggtcacattggtgtgtgaactggtctgtggtggagagcgg
ttgctgagggaggggctgatctcaccaggggccaaccctctgatactcaacgactccatc
tgtgctcagctctgtgacgggggccaggaggctctggagagagctaccaggttttgcagt
gagaagggtccagaagccatccgggttcttcttcctgacgagacgtctcccgctgttctc
actacgtcggagaacatcaccaagcgcctggccactgagaaggcctgtagctggctcacc
tccaacatcacagccctggtcaagcgagagtggaaaacgaagtttgaccgtgtgatgaag
tctcttcccagcccagaggctagtggtgtggaaggttctggttctggtcttggggctaaa
acgggagctgcagcagttacccaggagcagtcacgtaccccaaaacgggacaatggcaag
gaggaggctgcgacgtcctgccccccagactgcccccacagtgcaccactaccatctgat
gtcctggtagagattaaggaggtgttgagtattgcagtaggcccgaggtctgaaaaggag
gtgctgacttgtctacagctgaacgctctactgggcaaagtaggagacgcactgagctgc
aaaaagttctcattcccaatgcctgaacagatgctgatacgttgcaccgtcctactagcc
tgtaagctagtttcaggggagctgcccatggtgttcccccaggaggaatgtggtaggaca
gtgtctcctggtaggacagtgtctcctggtccagtactatcagactccccagtccaaagg
gtacgctgttcaatcaaagccctgctggagcagttgatcctcctctgggggagagactac
tgttcatcagcccccctccacctgctcttcacagaaatgacactcagtgctgtcctcatg
gccagcgactcacagtgggacaacttcctgttcctggtcagacagctggtagagcggggg
attctgggagagaaagaagtggtctctcattggaggaagctgtcacagttaccctggcca
acggaattcatagagaagatccagcagcagtcctcttccaccacagcccttcctccgcct
gaacttcagaaccacatggacatgttgcaggtctcaccacaacctgtagagggagccaac
taa
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