Salvelinus fontinalis (brook trout): 129812226
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Entry
129812226 CDS
T11136
Symbol
sema4d
Name
(RefSeq) semaphorin-4D isoform X1
KO
K06521
semaphorin 4
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sfon04090
]
129812226 (sema4d)
CD molecules [BR:
sfon04090
]
Proteins
129812226 (sema4d)
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GFIT
Motif
Pfam:
Sema
PSI
ig
I-set
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
129812226
NCBI-ProteinID:
XP_055720055
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Position
2:12940037..13026698
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AA seq
917 aa
AA seq
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MNQYSLAEAMTDKGNFTVPKLLPESNMVFGVLGVFLGLLLEVSTHGPHSIPRTSWKHEEL
KLVEFSEPGIFNYSTLLLSEDKDVLYVGAREAIFELRMTNVSIKNNKVQWKVPENHMSMC
IVKGKSKETDCLNYIRVLQVLDDKRLYVCGTHAFQPVCHYLSLKDFSLEGPAEDGRGKCS
FDPSQSFTTVMVDGELYSGTSYNFLGSEPIISRYSLSQSLLRTEYSTSWLNEPSFVFADV
IREGKNSADGEDDKIYYFFTEVSVEYEFFGKLLIPRIARVCKGDLGGQRTLQKKWTSFLK
AKLVCSMPELNFVFNVVNDVFILKTADWRETVIYGVFTSQWGNVGLSAVCAYDMLSVENV
FSNGKYMQKATVEQSHTKWVRYNGITPTPRPGACINNHHRLQNISSSLHLPDKTLQFVKD
HPLLEDPVLPIGNGPKLITKDVSYTQIAVERVQALDKNVYDVIFTGTDKGILHKSVVYDG
LVHTVEEIQLLHKSEPIKTLLLSSQGARSLYAGSDSGVVQSPTAFCDKYPSCSDCILTRD
PYCAWDPDSSTCVNIFHTQGLTHRNLIQSLNGDADKCPSVPGLSVENYQRVTVKPGSSAE
LPCLVQSNLAVVVWKQNSSTMTEASKFHLMGETGLLIYSVAPEDHGLYECWSLEWAPVAG
KNFSRLLAGYVLDVDVPRRPSPRGHPPQTASTLGSAHPHHQSTAATEGNNGNTVRPLPLT
SAPPSSTALTSPPPTHSASSSLTMRPSSSSTARLLPLSSSAVPLPETRDPATEYLQHDNS
STFFFLFLLFFLLFLAALVYNCYMQYLPGPCLRLRAALLGSQKKPQSEYLACEAGLMEPV
TVDKLDVKDQIRLTQNGVQLRALRDTGYETEPECSNGKIPSRSYGGEDSPSKEKPFDVDC
DSQPIEYADADQEASPY
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaatattcgctagctgaagccatgacagacaaaggaaacttcacggttccgaag
ctgctcccggaatccaacatggtgttcggagttctaggtgtgttcctgggtctactcctt
gaggtttctacacacggaccccacagcattccccggacctcttggaaacacgaagagctc
aagttggtggagttttctgagcccggcatcttcaactattccactctgttgttgagtgag
gataaggatgtgctgtacgtgggagcgagggaggccatctttgaactccgcatgaccaat
gtgtcaatcaagaacaacaaggttcaatggaaggtccctgaaaaccacatgtcgatgtgc
atcgtaaaaggaaaatctaaagagacagactgtctaaactacatccgggtgttacaagtg
ttggacgacaagcgactgtatgtctgtgggacacatgcctttcagcctgtctgtcactac
ctgtccctaaaggatttcagtctggagggtccagcggaggacgggagagggaagtgttcc
tttgacccatctcagagcttcacaacggtcatggttgatggagaactttactctggaaca
tcgtataacttcttaggaagtgagccgatcatctccagatattctctttcacagagtctg
ttgcggacagagtattcaacgtcttggctgaacgaacccagttttgtttttgctgatgtc
atcagagaggggaagaacagtgcagatggcgaggacgataagatctactacttcttcact
gaggtgtctgtggagtacgagttctttggcaagctgctcatccccaggatagcacgcgtc
tgtaagggggatctggggggccagcggacgttacagaagaaatggaccagtttcctgaag
gccaagctggtgtgttccatgccagagctcaactttgtgttcaacgtggttaatgacgtg
ttcatactgaagactgctgactggagagagactgtcatctacggagtgttcacatcccag
tggggaaacgtagggctgtctgcagtgtgtgcctacgacatgttgtcagtagaaaatgta
ttctccaatgggaagtacatgcagaaagccacagtggaacagtctcacaccaagtgggtg
aggtacaacgggatcacccccacccctcgcccaggagcttgcatcaacaaccaccaccgt
ctccagaacatcagcagctctctccacctgcctgacaagaccctgcagtttgttaaggac
catcccttactggaagaccccgtccttcctatcggcaacgggcccaaactcatcaccaag
gacgtcagctacacccagatcgctgtggagagggtgcaggcgctggacaagaacgtatat
gacgtcatattcactgggaccgataaaggaatcctgcacaaatcggtggtgtatgatggg
ctggtccatacagtggaagagattcagcttctccacaaatctgagccaatcaaaaccttg
cttctgtcatcacaaggggcgaggtccctgtacgctggctcggactcgggcgtggtgcag
tctcctactgcgttctgtgacaagtacccatcctgttcagactgtatcttgacccgggac
ccttactgtgcctgggacccagactcttccacctgtgtcaacatcttccacacccagggc
ctcacacaccgaaacttgatccagagccttaatggggatgcagacaagtgtccctcagtg
ccagggctctccgtggagaactaccagcgtgtgacagttaaaccagggagttcagctgag
ctgccatgcctggttcagtccaacctggccgtggtggtctggaagcagaacagcagcacc
atgaccgaggcctccaagttccacctgatgggtgagacaggtctgctcatttacagcgtg
gccccagaggaccacggcctatacgagtgctggtcactggagtgggcccctgttgcaggg
aagaacttcagccgcctcctggctgggtatgtcctagacgtggatgtccccaggaggcct
tcaccgcgaggccacccccctcagaccgccagcaccctcggctccgctcacccccaccac
cagtccaccgctgccactgaaggtaataacggtaacaccgtgagacccctcccactaact
tcagcccctcccagctccaccgccctcacctcaccaccacccactcacagcgcctcgtca
tcactaaccatgcgccccagcagcagcagcaccgccaggctccttcccctcagctccagc
gctgtcccgctcccagagacccgggaccctgcgacagagtacctccaacacgacaacagc
agtactttcttcttcctcttcctcctgttcttcctcctcttcctggctgccctggtctac
aactgttacatgcagtacctaccagggccgtgtcttcgtcttcgtgcggctctgctggga
agccagaagaagccccagtccgagtatttagcctgcgaggctggcctcatggagcctgtc
acagtagacaagctggacgtaaaggatcagatccgcctcactcagaatggggtacagctc
cgagccctgagagacaccggctatgagaccgagccagagtgtagcaacggcaagatcccc
tctcgcagctacgggggagaggacagtccttctaaagagaagccctttgacgtggactgt
gactcacagcctattgaatatgcagacgcagatcaagaagcatcaccgtactaa
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