Salvelinus fontinalis (brook trout): 129812509
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Entry
129812509 CDS
T11136
Name
(RefSeq) photoreceptor cilium actin regulator-like
KO
K24165
photoreceptor cilium actin regulator
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129812509
04812 Cytoskeleton proteins [BR:
sfon04812
]
129812509
Cilium and associated proteins [BR:
sfon03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
129812509
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
129812509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
DUF5340
Motif
Other DBs
NCBI-GeneID:
129812509
NCBI-ProteinID:
XP_055720097
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Position
16:1065825..1080821
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AA seq
1157 aa
AA seq
DB search
MGCSPSKGNNFPGQGTFRSGRTLLPGGQESQGKSQSNDGGSGGSSGTGDTDGETWERGSG
ESRLAGQNYSVQKEAPSTPQKKRPSLTELVPEGVILDRKVVTQETGPHVKEKQGDSQDMA
DKKGGRKPKKNGKGIKPTKKKEKEKKSPLVEQKVDFPEPLVKAHQAVYAYLNPSISKYEI
LLRLLEQATQTQVSVQPMVTFMAMRYEEINRRLEEMADEGERLLKDNGEHLAWPSPMKNL
SSFPPLTSGSTNVESSPDLLQQLLQYTTQRMQNVGQSVGGIGNSALEEAAEYFSSVSELL
EEKLKAKRNVETRLMQLLTRIEAASLRTTGPEDSALFSEDSGIGAESESLAGSERIHRES
CEYTATNQTTPYSPIGSNAPLVRQGAPRRKFTKKVSPSNSLNSIDSACTRMGKEQKDTES
LLGSAFLDGGEEDDNDEEGEEEGEGGRKQSNSLPSDPNQQPNRLVPRRIENPQNVEMTLK
MKDAISGRIRFVPSQCDSAKTKPTDSPKTSRRQWTEGEERSPKRPQTAAPVQRAIKKTPV
PKEGRSQSVESLRSKGEDPTLLELERTQRDLSQRLERMSKGRMEENAKTGPTKQNPGYTA
KSLASKRLQSTLRKNNNTFPIQDKAGLTKCSSWEQGASKDMEEENEKKDKTTTKGLLKAT
LPPSPPLSPRLSSGLYQGRNSVKRLIDTFSQGVEEPKQEASKMLGPIEGVRKCGVLVMPG
VGDIEAILSSGVSSCRTDDLDVQSLPPPPLEVLMDNSFEGAQILTVSDVDDGVASRGRSP
IPKRAMASQKLRASMQSVTLLPSRGNLPQRSSSMPPVRTVRQDTSASSRVSHNEPQLEVN
PETEEAATLYKQSRKVIHLRHSSESSMKKGQAVPRWPSPNRAASGCSQSDDSSFKTVPPT
STVSIQPPTTLPVSRARILPSTPSTPTGLHRRFPSPPTFRTLSTLPSSTSPPVIRKLPTP
PSLQRRLPSPPASRHVMNPNSSSSGSTHSFKAPSPPASPRVQRWKRENNSDDSTPRSSAI
SQLISNARSVFCPASPSLFEAQPYSVPQYPQTWASTGGHVVPRPWGDRGRLPMSVRGPQP
FIRRSHSDQRPSLSLPPRATIVSFAETCGSEPAINTQGLEDGPTRDDKSWDSKSDLRWNA
RSASHPDLCIVGQGLTL
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgggctgttccccgtctaaaggtaacaattttccgggtcagggcacctttaggagcgga
aggacactactaccagggggccaagagagtcaagggaagtcccagtctaatgatggaggg
agtggaggctcctccggaacaggagacactgatggagagacttgggagagaggaagtggg
gagagtagactggctggtcagaactactctgttcagaaggaagcaccttcaaccccacag
aaaaagagaccctccctgaccgagttggttccagagggggtcatccttgacagaaaagtg
gtgactcaagagacagggccacatgtaaaagagaaacaaggagatagtcaagacatggct
gacaaaaagggtggacgaaaaccaaagaaaaatggcaaaggaatcaaaccgaccaaaaag
aaagagaaggagaaaaaatctcccctcgtggagcagaaagtagattttccggaaccttta
gtgaaagcccaccaggctgtgtatgcctatttaaacccaagcatcagcaaatatgagatt
ctgctgcggctcctggagcaggcgacccaaacccaggtgtctgtgcagccaatggtgacc
ttcatggctatgcgctacgaggaaatcaaccgacggctagaggaaatggcagacgagggt
gaaaggcttctgaaggacaatggggagcatctcgcctggccaagcccaatgaaaaaccta
tccagtttcccccccctcacgtctggatccaccaatgttgagtcttcaccagacctcttg
cagcagctacttcagtatactactcaaaggatgcaaaatgtgggccagtctgtgggtggc
attgggaactctgccttagaggaggcggctgagtacttcagctctgtctctgagctgctg
gaagagaaattaaaagctaagcgtaatgtggagacaagactgatgcagttgctgactcgc
attgaggctgcctcactccgtacaaccggaccagaggactctgcattgttcagtgaggac
agtggaattggggccgagagcgagtcactagctgggtctgaaagaattcaccgtgaaagc
tgtgagtacactgcgaccaaccaaaccactccttacagtcccattggcagcaatgctccc
ctagtccggcaaggggcaccaaggcgaaagtttaccaagaaagtgagtccaagcaactcc
ctaaactccatagactcggcctgcaccagaatgggtaaagagcagaaagacacagagtca
ctattaggatctgcctttttagatggtggtgaggaggatgacaatgatgaggagggggaa
gaggagggagaaggtggcaggaagcaatctaactccttaccatctgatcctaaccagcaa
cctaatcgcctggttcccaggcgcatagagaaccctcaaaacgtggaaatgaccctgaaa
atgaaagatgccataagtggtcggattagatttgttccctcacaatgtgacagtgccaaa
actaaaccaacagatagccccaagaccagcaggcgccagtggacagagggggaggagcga
tcaccaaaaaggccccaaacagcagcccctgtacagagggcaattaaaaagacccctgtt
cccaaagagggccgttcacagtctgtagaatccctccgcagcaaaggtgaagatccaaca
ttgcttgaactagagaggacacagagggatctgagtcagaggctagagaggatgagcaaa
ggcaggatggaagagaatgccaagacaggtcccactaaacagaacccaggatatactgca
aagtccctggcatccaaacgtctacaatccaccctgcggaagaacaacaacacttttcca
attcaggacaaggcagggcttactaagtgtagctcctgggaacagggggcaagcaaggac
atggaggaggaaaatgaaaagaaagacaagacaaccaccaaggggctgttgaaagccacc
ctacctcctagccctccactgtcacctcgtctgtcctcagggctgtaccagggaaggaat
tctgtcaaaaggctgattgacaccttcagccagggggtggaagagcccaaacaagaggcc
tccaaaatgttagggccaatcgaaggtgttcgaaagtgtggggtccttgttatgcctgga
gtaggtgacatcgaggccatactaagcagtggggtcagcagttgtaggacagatgactta
gacgtacaaagtctgccaccccctcctcttgaggtcctgatggacaattcctttgaaggt
gcacaaatcctcacagtaagcgatgtagacgatggggttgcaagtaggggccgatcccct
attcccaagagggctatggcatctcagaagctgcgtgcttccatgcagtctgtgacattg
ctacccagcagaggcaacctgccccagcgctcgagcagcatgccccctgtccggactgta
cggcaggatacctctgctagttccagggttagccacaatgagcctcagctggaggtaaac
ccagagacagaggaggcggccactctctacaagcaatccagaaaagtaatccacttgcgg
cactcctcagagtcttcgatgaagaaaggtcaggctgtgcccaggtggccctctcccaat
cgagctgcatcgggatgtagtcaaagcgatgacagctcctttaagacagtgcctcccact
tcaaccgtcagtatccaaccacctaccaccctgcctgtatctagagctcgaatactgcct
tccacaccttcaaccccaaccggcttgcatcgaagattccccagtccccccaccttcaga
acgctgtctacgcttccatcctcaaccagccctccggtcattcgcaaacttcccacccca
ccatcacttcagagaagactcccaagcccacctgcctcaagacatgtaatgaacccaaac
tccagctcttctggctccacacattctttcaaggcaccctcaccaccagcgtcccctagg
gtacaaagatggaaacgagagaacaacagcgacgactccaccccaaggtcttcagctatc
tctcagttaatcagtaacgctcgctctgttttctgcccggcctcgccctcactgtttgag
gcccagccttattccgtaccccagtacccacagacttgggcctccaccggtggccatgtt
gtcccacgtccttggggagatcgtggcaggctgcctatgtccgtgcgagggccacagcct
ttcatccgacgcagccactcagaccagaggcccagtctaagcctaccgcccagggcaacc
atcgtctcattcgcagagacttgtgggagtgagccagccatcaacacacaagggctggag
gacgggccaaccagagacgacaagtcatgggacagcaaatcggacttaagatggaatgcc
cgctctgcttcgcacccggacctatgcattgtgggtcagggccttacattgtga
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