Salvelinus fontinalis (brook trout): 129812555
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Entry
129812555 CDS
T11136
Name
(RefSeq) bifunctional glutamate/proline--tRNA ligase-like isoform X1
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon00860
Porphyrin metabolism
sfon00970
Aminoacyl-tRNA biosynthesis
sfon01100
Metabolic pathways
sfon01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
129812555
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129812555
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfon01007
]
129812555
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfon03016
]
129812555
Enzymes [BR:
sfon01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
129812555
6.1.1.17 glutamate---tRNA ligase
129812555
Amino acid related enzymes [BR:
sfon01007
]
Aminoacyl-tRNA synthetase
Class I (A)
129812555
Transfer RNA biogenesis [BR:
sfon03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
129812555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
WHEP-TRS
tRNA-synt_2b
HGTP_anticodon
ProRS-C_1
tRNA-synt_1c_C
tRNA-synt_1c_C2
Arc1p_N_like
GST_C
GST_C_3
GST_C_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
129812555
NCBI-ProteinID:
XP_055720181
LinkDB
All DBs
Position
16:5247833..5314010
Genome browser
AA seq
1670 aa
AA seq
DB search
MALNLTINSSNPPLGALLTAEHVKGSVKVSVEEGKDNKLCVSQSVQFSDLNSITRYLARM
APSLGLYGSNMLEQTEVDHWLEFSAQRVCGQSGLGAALGELDKALELRTFLVGHSLTLAD
ICVWAVLKGSSEWQTQAGAFSHVARWFSFLGSQVPFTTVDHKYTNSKPQVHPSRNSNSEE
KKQQDVGKFVELPGAEMGKVVVRFPPEASGYLHIGHAKAALLNQHYQVTFKGKLIMRFDD
TNPEKEKEDFEKVILEDVAMLQIKPDQFTYTSDHFPRIQGMAEQLLREGKAYIDDTPPEQ
MKAEREQRTESRHRSNSVEQNLKMWEEMKAGTEYGQTCCMRAKMDMASNNGCMRDPTFYR
CKNAPHPRTGTTYRVYPTYDFACPIVDSVEGVTHALRTTEYHDRDDQFYWVIEALGLRKP
YIWEYARLNLNNTVLSKRKLTWFVDQGYVDGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQ
GGSRSVVNMEWDKIWAFNKKLPISCIKVIDPVAPRYTALSGSYSVPVVIPEAPEEMKMAV
KHPKNTEVGMKAVWYGPRVLVEGADAETFTEGETVTFINWGNIIITKIHKDPRGKVTSLE
GKLNLENKDFKKTTKITWLAETPHAPLLPTVCVNYQHLITKPVMGKEDDFKEYINKQSKL
EEKMLGDPCLKDLKKGDIIQLQRRGFYICDQPYEPISPYSCKESPCVLLYIPDGHTKEMP
TAGSKSKSHAATTSASPAKCNTTPVSAPAPPTASDTGTVFSCIVAQGEKVRDLKTTKAPK
EEVDKAVKELLSLKAQFKHLTGQDYKPGMGLPASSTPQKAASPSSDSVSCPFACVTQQGE
LVRKLKSEKAPKDQVDAAVKQLLAFKAEFKRITGQEYNPGMIPPDAAPAKNAPTASSSSA
SGLYESVTKQGDTVRKLKSEKAPKDQVDAALKELLALKAEYKQVTGHDYKPGASPAPAPV
QSNPAPAPAPVQSNPAPTATSGSGIYERVTQQGDLVRKLKTEKAPKDQVDTAVKQLLSLK
AEYKQATGQDYKPGVAPAVSPAPVQASPAPQDQSGSSPQALFTQVVQKGELVRKLKSEKA
PKDQVDCAVKQLLALKTQYKALTGEDYNVVAAAGASSREDKNRKDRENKSEKQAGGGGGG
GKKQQKGEKGKEALLGGTGGGGDGGPKKQTRLGLEAKKEENLADWYSQVITKAEMIEYYD
VSGCYVLRPWSYSIWESIKEFFDREIKKLGVENCYFPMFVSQAALEKEKSHIADFAPEVA
WVTRSGNTELAEPIAVRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFL
RTREFLWQEGHTAFATKEEATEEVLQILDLYARVYEELMAIPVVKGRKTEKEKFAGGDYT
TTVEAFISASGRAIQGATSHHLGQNFSRMFNIEFEDPRKPGEKQLAYQNSWGITTRTIGV
LTMVHGDNMGLVLPPRVACLQVIIIPCGITASLPEAEKESLLAQCSKYLARLQRGETRVK
ADLRDNYSPGWKFNHWELKGVPIRLEVGPKDLKQGQCVAVRRDTGEKITLPEADTEKRLI
QLLEDIQTNLFKRASDDLNKHMVVADSMEQFQKDLDQGRIVQIPFCGGIECEDWIKKTTA
KDQDLEPGAPSMGAKSLCIPFKPLKPLQPGQMCVSGKEAAQYYTLFGRSY
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaaaccttaccatcaacagcagcaaccctcctttaggggcgctgttgaccgca
gagcatgtgaagggcagtgtgaaggtgtctgtggaggagggcaaagacaacaagctctgc
gtctcacagtcagtgcagttcagcgatttgaactccatcacgcgctaccttgcccgcatg
gctcccagtctgggcctgtacggctccaacatgctggaacaaactgaggtggaccactgg
ctggagttcagtgcacaacgtgtgtgtggccagtctggcctgggtgcagccctgggggaa
ctggacaaggctctggagctgcgcacttttctggtgggccacagcttgaccctggccgac
atctgtgtgtgggccgtgctcaaaggtagcagcgagtggcagacgcaagctggggccttc
tcccatgtggctcgctggttctctttcctgggctcccaggtgcccttcaccaccgtggac
cacaagtacaccaacagcaaaccacaagtacacccctcacgcaattccaattctgaggag
aagaagcagcaggatgtggggaagtttgtggagctgcctggagccgagatgggcaaggtg
gtggtccgcttcccccccgaggccagcgggtacctgcacattggccacgccaaggctgcc
ctgctcaaccagcactaccaggtgaccttcaagggcaagctcatcatgcgcttcgacgac
accaaccctgagaaggagaaggaggactttgagaaggtgatcctggaggacgtggccatg
ctgcagatcaagccagaccagttcacctacaccagcgaccactttccccgcatccagggc
atggcggagcagctgctgagggagggcaaggcctacatcgacgacacacccccagagcag
atgaaggcagagagggagcagcgcacagagtcacgccaccgcagcaactcggtggagcag
aacctaaagatgtgggaggagatgaaggcgggcacggagtacggccagacctgctgcatg
cgggccaagatggacatggcctccaacaatggatgcatgcgcgaccccaccttctaccgc
tgcaagaatgccccccacccccgaactggcaccacctacagggtgtaccccacgtacgac
ttcgcctgccccatcgtggacagcgtcgagggtgtgacccacgcgctccgcaccacggag
taccacgaccgcgacgaccagttctactgggtgattgaggcgctgggcctgcgcaagccc
tacatctgggagtacgcccggctcaacctcaacaacacggtgctctccaaacgcaagctc
acgtggtttgtcgaccagggctacgtcgacggctgggatgacccccgcttcccgactgtc
agaggtgtcctgcgcagaggaatgaccgtcgagggcctcaagcagttcattgctgcccag
ggtggatccaggtctgtggtcaacatggaatgggacaagatctgggcctttaacaagaag
ctgccaattagctgtatcaaggttatcgacccagtggcgcccagatacacagccctgtca
ggatcctactccgtccctgttgtcatccccgaagcaccagaggagatgaagatggccgtc
aaacaccccaagaacacagaggtgggtatgaaggctgtgtggtacggacccagggtgctg
gtggagggggcggacgcagagaccttcaccgagggagagacggtcaccttcatcaactgg
ggcaacatcatcatcaccaagatccacaaagatcccagaggtaaggtcacctccctggag
ggcaagctgaacctggaaaacaaggacttcaagaagaccaccaagatcacgtggctggcc
gagaccccccacgcacccctgctgcccacagtctgtgtcaactaccagcacctcatcacc
aagcccgtcatgggcaaggaggacgacttcaaggagtacatcaacaaacagagcaagctg
gaggagaagatgctgggagacccatgtctgaaggacctgaagaagggtgacatcatccag
ctgcaaaggcgaggcttctacatctgtgaccagccctacgagccaatcagtccctatagc
tgtaaggagagtccttgtgtgctgctgtacatccccgacggccacaccaaggagatgccc
accgccggctctaagagcaagagccatgccgccaccacatctgcctccccagccaagtgc
aacaccaccccggtctctgccccagccccccctaccgctagcgacaccggcaccgttttc
tcctgcattgtggctcaaggcgagaaggtgcgcgatttgaaaaccaccaaggcccccaag
gaggaggtggacaaagcggtgaaagagctgctctcactcaaggcccagttcaagcatctg
actggccaggactacaaaccaggcatgggcctgcccgctagctccacccctcagaaggca
gcatccccttcttctgactccgtctcctgcccctttgcttgcgtcacccagcagggggag
ttagtgaggaagcttaaatccgagaaagcacccaaggaccaggttgatgctgcagtcaaa
cagctgctggctttcaaagctgagttcaaacggatcacaggacaagagtacaatccaggg
atgatccctcctgacgctgccccagccaagaatgcccccactgcttcatcctcctctgcc
tcaggcctatatgaaagtgtgaccaaacagggagacactgttaggaagcttaaatctgag
aaagcacccaaggaccaggttgatgctgccctgaaggagctcttagccttgaaggcagag
tacaaacaggtgacgggtcacgactacaagccaggagcttcccctgctcctgccccagtc
cagagcaacccagcccccgctcctgccccagtccagagcaacccagcccccacagccact
tctggctcaggcatctatgagcgcgtgactcagcagggtgacctggtgaggaaattgaag
accgagaaggcccccaaggaccaggtggacaccgctgtcaagcagctgctgtcactcaaa
gctgagtataagcaggcgactggccaggactacaaaccaggcgtggccccagctgtcagc
cctgcccctgttcaggctagccccgccccccaggaccagtctggttcctcccctcaggca
ctcttcacccaggttgtccaaaagggggagctagtgaggaagctgaaatcagagaaggct
cctaaggaccaggtggactgtgccgtgaagcagctgctggccctgaagactcagtacaag
gccctcaccggagaggactacaatgttgtggctgccgctggagcctcgagcagagaggac
aagaaccgcaaggaccgagagaacaagtctgagaaacaggcaggaggaggaggaggagga
gggaagaagcagcaaaagggagaaaagggcaaggaggccttgttgggaggcacaggggga
ggaggagatggtggtcccaagaaacagacacgactggggctggaggctaagaaggaggag
aacctagctgattggtactctcaggtgatcaccaaggcagagatgattgagtactatgac
gtgagcggctgctacgtgctgcgaccctggtcctactctatctgggagtccatcaaggag
ttctttgaccgcgagatcaagaagctgggtgtggagaactgctacttccccatgttcgtc
tcgcaggctgccctggagaaagagaagtcccacatagctgattttgccccagaggttgcc
tgggtaacacggtcagggaacactgagcttgccgagcccatcgctgtccgacccactagt
gaaactgtgatgtaccctgcctacgccaaatgggtccagtcccacagagacctacctatc
aaactcaaccagtggtgcaacgttgtgaggtgggagttcaagcacccccagcccttccta
aggaccagagagttcctgtggcaggaaggacacacggcttttgccaccaaagaggaggcc
acggaagaggtgttacagatccttgacttgtacgcacgggtctacgaggagctgatggcc
atccctgtggtaaagggcagaaagaccgagaaggagaagtttgcaggaggagactacacg
accaccgtggaggccttcatctctgccagcggcagagccatccagggtgccacatcccac
cacctgggccaaaacttctcccggatgtttaacatcgagttcgaggaccccaggaagccg
ggcgagaagcagctagcctaccagaactcgtggggcatcaccacccgcacaatcggcgtg
ctcaccatggtacatggggacaacatgggcctggtgctgccccccagagttgcctgtctc
caggtgatcatcatcccgtgtggcatcacagcctccctgcctgaggctgagaaggagtct
ctgctggcccagtgctccaagtacctggcccggctgcagaggggagagacccgggtaaag
gccgacctccgagacaactactctcccggctggaagttcaaccactgggaactcaagggc
gtgcccattcgccttgaggtgggtcctaaggatctgaagcagggtcagtgtgtggccgtg
aggagagacacgggggagaagatcaccctgcccgaggcagacaccgagaagaggctcata
cagctactggaggacatccagaccaacctcttcaagagggcatcggacgacctgaacaaa
catatggtggtagcagactctatggaacagttccagaaagacctggaccagggcaggata
gtccagatccccttctgtggaggcatcgagtgtgaagactggatcaagaagaccactgcc
aaggaccaggatctggagcccggtgccccctccatgggtgcaaagagcctgtgtatcccc
ttcaagcccctcaagcccctgcagccgggtcagatgtgcgtcagcggcaaggaggccgcc
cagtattacaccctgtttggccgcagctactaa
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