Salvelinus fontinalis (brook trout): 129812696
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Entry
129812696 CDS
T11136
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129812696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129812696
03021 Transcription machinery [BR:
sfon03021
]
129812696
03036 Chromosome and associated proteins [BR:
sfon03036
]
129812696
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
ARID
129812696
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129812696
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129812696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
129812696
NCBI-ProteinID:
XP_055720463
LinkDB
All DBs
Position
16:complement(15179916..15378885)
Genome browser
AA seq
2423 aa
AA seq
DB search
MAAQVASAPTTTNNKKNKLSGSLGQEIHSGKSGGGTISRSGAMLGAGDGTNTMNNVDHHH
QNELNMVNSTSPNNNSDTREKESGNNITSSNSTTSLEGMETGLIANHKQKNVSVDPPQHL
TPPQQQSQFNPFPQHQQHQIQSNNINNSQATRGESENQHHGGKRGVLASQTEQQMLSKGE
GDHTCKPGERMGARYEHANLGPTTDINSQPQSAGGDSAISEFNNYYGTSRVGACYDQHGG
QSTGMGMMHSSGPNNMDPVHNSHEGYHNSQYNHYPGYRQGYGGAGYGMMAPSRQGSNMLI
GPGSNTPASHVKAAMGAASSGSGGSVGGFQRFPGHTQHPSGATPTLNQLLTSPSPMMRGY
GSGYHQDYNSPSAQQQAGIGLGKDMTSQYGSTTHGWPGQQRNHPSMSPGNGGQGISRPQV
ASVDFMAMKRSHLYGMGNNPYSQQQQGGPYPSQPYGSPATHRYPMGMQGRGQAGMGGMQY
PQQQQVPPQYGQQGMGGYSQQQQGTPPGSYFSPPQQNPTAPTQPPYLPPRAPPQQEAPQE
SYRDSTRSQQHVPGNSGKANLEDMGLIPQDCPSSLPDLSGSIDDLPTGTDAGHSSAVSAT
GSTSSQGEQSNPSQSPFSPHASPHLSGRGSGPSPSPVGSPVGSNQSRSGSGPISPVSGPT
TAQGSQMAPQIPVNMSDVPHSPLTQSPMPQERGFMSNMQRNQSGSQFAPPLPQSGPSMSP
HPSPGPGPGGQMYPGMGPRPYLQGGSSGPYGPQGSQANQYGPQGNYPLPPNYGGTPSANY
SGPGPGMTNSLGMNASSPMHGQGPGQPMPMGRSLGAGSRPYPNMAPSSPSMPQPAGPGMG
PPSLGNVNRKAQEAATSVAQAAVNSVQSSRPPCVRSPALHTSSGPSPLPPLPTTPTPPPP
PPPPPPPPPPLQPPHPNYNTPHSQQHGQGSYPGPGINQMVPPINQSQGNNSGMGTPQGPP
YNMPPSGPMGMAGDGMVTPVGKQKMDGKEESMPTNEPPRPKDGYSGSQCVSQPTTPGAMP
VPSPLSPSPASLSSYHGDDSDSISSPVWPKTPSSPKPNSSTMTNERITRLYDMGGEPERR
GWVDRYLSFMEERGTPVPYLPAVGKKPLDLYRLYMVVREIGGLAMVNKNKKWRELSTSLS
VGTSSSSASCLKKQYIQYLFAYECKVERGEDPPADSNTGTGGDNRKQAKVQPPSPANSGS
LQGPQTPQSSGSSSMAEMSGDLKPPTPASTPQGQGQVTPIPASRNSVVSVQDPFSEVSDP
VFQKRNSLPPGGPGGPYQQGVNMPPDVMMRMQYEKDPFAGMRKVAGGDSYMPGQMPSGGM
QEMYGRPPSGMGQRSQYPYGPGYDRRPDHVIGMEGSMGTPGSQSNMGPSNSEGSIYSPNR
YPSQLRHEGYGQQYPGMSYGMHPSGMYPQQQGYKRPMEGMYGPPGKRHDGDMYGPPGKRH
EGDMYGPPGKRHEGDMYGPPGKRHEGDMYGPPGKRHDGDMYGTPGKRHEGEMYGPPGKRH
EGEMYAMQYGSQQPDMYNQYSAGYSGPERRPMQGQFPYPSPYSRERMQASGQGQHPQHPM
GPQMMAGGPPSNNGVEGPQGPNMWPSRTDMGYPYSNRQGAPSQVPPYGPLGRGEDMEGRP
IQDGQWLGHGGHRQSSYMSGGMTPMSSRQPPSAYQTSPSMANHLPRAPSPGSFQRSMEAR
MSPNKAAYMGSMKMPCKPGMPMPGQGSGHPGQVPPNLRRDLNYPLGSVEATMPLLKPRRK
MTSKDTGTPEAWRVMMSLKSGLLGESTWALDTVNILLYDDSTVASFTLAQLPGFLELIVE
YFRHCVMEIFGILEEYEIGTIGQKTLLGPEACNQGEELTSEPEMDCEASQPEPEPEQEVE
RGEVEKGEVENGEDKPADITEKMTVELMSPPSATEPAPEGMKEESEAEVKVKKEEGEKEQ
EGEKEKGKEEGENPTESKKATAESKEDYPNQSEPRPQQASKYDKFPIKILHKEDLIEDMT
EQLAHVTEFTSGLLHWQVGGGDSTAHIQTHFEGRGEQPDRTEGERDECAILNKEQETDSR
TEEKGNRITATIDDILCARLEALSEGHPTHSAPTYPFRLHQGGGHMHITLLEDEPRCLNE
APLSTASPWQDSLAKRCLCVSNILRSLSFIPGNDSDMSHHPGLVLILGRLLLLHHQHPER
KRTSPSYQREEVQERGLACSKDEWWWDCLTILREDTLVTLANISGQLDLSLYPETICLPI
LDGLLHWMVCPSAEAQDPFPSAAPHSPLTPQRLVLECLCKLSIQDNNVDLLLATPPFSRQ
EKLYATLVRYVGQRKNQVYREMAVATLSNLAQGDSTSARAIAVQKSSVGNLMGFLEDGVS
MAQYQQNPHSLLHMVHHPPMEPPSVNMMCRAAKALLAMAKVEENRPEFVLYEGRLLDISI
SSVLNPGVASIVCEVLFQFVKKL
NT seq
7272 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcagcaccgacgacaactaataataagaaaaataaattgtct
ggcagtttgggtcaagagatacattcggggaaatcgggaggaggaactatatcgaggtct
ggagcaatgcttggagctggagatgggactaacacaatgaataatgtagaccatcaccac
caaaacgagctcaacatggtcaattcaacttctccgaataacaattctgacacacgggag
aaggagagtggaaataacataacatcgtcaaattcgacgacctctcttgagggaatggag
acgggtttgatagcaaaccataaacagaaaaatgtgagtgtagatccccctcagcacctc
acgccgccgcaacagcagtcacaatttaacccgtttcctcagcatcagcagcaccagata
caaagtaacaacatcaacaacagccaagcgacaaggggagagagtgagaatcagcaccac
ggagggaagaggggtgttttggcgagccagacagagcagcagatgctgagtaaaggtgaa
ggggatcatacctgtaaaccaggggagcgaatgggtgccaggtatgaacatgccaacttg
ggaccaacgaccgacatcaacagccagccccagagcgcaggaggggacagcgctatttca
gagtttaataactactatggcacttcccgagtaggggcctgctatgatcaacatggcgga
caaagcactgggatggggatgatgcactcctcgggacccaacaacatggacccagtgcac
aactcccacgaaggataccacaacagccagtacaaccactaccctggctaccggcagggc
tacggtggagcgggctacggtatgatggccccatccagacagggcagtaacatgctgatt
ggccctggcagtaacactccagctagccatgtcaaggctgctatgggagctgcttcctcc
ggttctggtggaagtgttgggggctttcagagattcccaggacatactcagcatccctcg
ggagccaccccaactctaaaccaactgctgacgtctccaagtccaatgatgcgaggttat
ggcagtggctatcatcaagactataacagtccctctgcacaacaacaagctggcatcggc
ttaggcaaagacatgacttctcagtatggctccacaacccatggctggccagggcaacag
agaaatcacccgtccatgagtcctggaaacggagggcaaggtatcagcagaccacaggtg
gcttccgtggacttcatggctatgaagcgctcccatctctacgggatgggcaacaacccc
tactctcagcagcagcagggcgggccctaccccagccagccatacggatcgcccgctaca
cacagatacccaatgggaatgcaggggaggggccaggcgggcatgggcggcatgcagtac
cctcaacagcagcaggttcccccccagtacggccagcagggtatgggaggatacagccag
cagcagcagggaacacctccgggatcctacttcagccccccccagcagaaccccaccgcc
cccacacagcccccctacctgcctccccgcgccccaccccagcaggaggctccgcaggag
agctacagagacagcaccaggagtcagcagcatgtcccagggaattctgggaaggccaac
cttgaggacatgggtctgatcccgcaggactgcccctccagcctcccggacctgtctggc
tccatagacgacctccctacagggacggacgctggtcacagttcagccgtcagtgctaca
ggctccaccagtagccagggggagcagagtaacccgtcccagtcacccttctcaccccac
gcatcacctcacctgtctggccgaggcagcggcccatcgccctctcctgttggctccccc
gtgggctctaaccaatcacgctccggctctggcccaatctccccagttagcggcccaacc
acagcacaagggtcccagatggccccccagatccccgtcaacatgtcggatgtccctcac
tcccccttgacgcagtcccccatgcctcaggagaggggctttatgtccaacatgcagaga
aaccagtctggctcccagtttgcaccaccactacctcagtcggggccttccatgtcccct
cacccctctcctggtcctggtcctggaggacaaatgtacccagggatggggcccaggccc
tacctccagggtggctccagtggcccctacggaccccagggatcccaggcaaaccagtat
ggaccccaaggtaactacccacttccacccaactacggcgggacccccagtgccaactac
agcggccccggccctggcatgaccaacagcctgggtatgaatgccagcagccccatgcac
ggccagggtcccgggcagcccatgcccatgggccgcagtcttggcgcgggcagccgaccc
taccccaacatggcccccagttcccccagtatgccccagccggcaggcccagggatgggc
cctccttcactgggcaacgtcaaccgcaaggcccaggaggcagccacttccgttgcgcag
gccgcagtcaactctgtacagagcagtagacctccctgtgtgaggtccccagccctccac
acctcttctggacccagtcccctgccccctcttcccaccacacccacccctcctcctcct
cctcctcctcctcctcctcctcctcctcctctccaacctccacaccccaactacaacacc
cctcattctcagcaacacggacagggcagctacccaggccctggcataaaccagatggtg
ccccccatcaaccagtcgcagggcaacaactcaggcatgggcacgccacagggtccaccc
tacaatatgccaccctcagggcccatggggatggctggggatgggatggtgactccagtt
gggaagcagaaaatggatggcaaggaggagagcatgcccaccaatgaacctcccagaccc
aaggatggctacagtggatcccagtgtgtctcccagcctaccacccctggtgccatgcct
gtcccctctcctctgtcccccagcccagccagcctgtcctcctaccatggggatgacagt
gacagcattagcagccccgtctggccaaagactccttccagccctaagcccaactcgtcc
accatgactaacgagcgaatcacacgtctgtatgatatgggtggggagccggagaggcgt
ggctgggtggaccgctacctttcctttatggaggagaggggtacacctgttccctacctc
cctgccgtgggcaagaagcccctggacctctacagactctacatggtggtcagggagata
gggggcctggccatggtgaacaagaacaagaagtggcgtgagctgtccactagtctgagt
gttggtacctccagcagctccgccagctgtctgaagaagcagtacatccagtacctgttt
gcttatgagtgtaaggtggagcgcggagaggacccgccggccgacagcaacactgggact
gggggggacaacaggaagcaggccaaggtgcagccgccctctcctgctaactcagggtcc
ctgcagggcccccagaccccccagtcgtcaggcagcagctccatggcagagatgtcaggt
gacctgaaaccccccaccccagcctcaaccccccagggccagggccaggtcacccccatc
ccagccagcaggaacagtgtggtcagtgtgcaggacccgttctctgaggtgagcgacccg
gtcttccagaagcgtaactccctccccccggggggccctgggggaccgtaccagcagggg
gtcaacatgccccctgacgtgatgatgaggatgcagtatgagaaggaccccttcgctggc
atgaggaaagtggcaggaggggattcctacatgccaggccagatgcccagcggtggcatg
caggagatgtatggcaggcctccatcaggcatgggccagcgttcccagtacccatacgga
ccaggctacgacaggagaccagaccatgtgatagggatggaggggagcatgggcaccccc
gggagccagagcaacatgggaccttccaacagcgagggcagcatatactctcccaacaga
tacccctcccagcttagacatgagggttacgggcagcagtaccctggcatgtcatatgga
atgcatccctcagggatgtacccacaacaacagggctacaagcgccccatggagggtatg
tacggccccccaggcaagaggcacgatggggacatgtacggccccccaggcaagaggcat
gagggggacatgtacggccccccaggcaagaggcacgagggggacatgtacggcccccca
ggcaagaggcacgagggggacatgtacggccccccaggcaagaggcacgatggggacatg
tacggcaccccaggcaagaggcacgagggggagatgtacggccccccaggcaagaggcac
gagggggagatgtacgccatgcagtacggcagccagcagcctgacatgtacaaccagtac
agtgctggttattctggtcctgagaggaggcccatgcagggccagttcccttacccctcc
ccctacagccgagagcgcatgcaggcctctggccaggggcagcacccccagcaccccatg
ggtccccagatgatggctggggggccaccctccaacaacggagtggaaggaccccagggg
cccaacatgtggccctccaggacagacatgggttatccctactctaacagacagggggca
ccctcccaggtaccgccatacggtcctttggggagaggagaggatatggagggccgaccc
atccaagatggtcagtggctcgggcacggaggccatcgccagtcctcctacatgtcaggt
ggtatgacccctatgtcctctcgccagcccccctctgcctaccagacctccccctccatg
gccaaccacctgccccgagcacccagccccggctccttccagcgctccatggaggcacgg
atgtcccccaacaaagctgcctatatgggctccatgaagatgccatgcaaaccgggcatg
cccatgccagggcagggtagtgggcacccaggccaggtcccacctaacctgcggagagac
ctcaactaccctctaggatctgtagaggccaccatgccccttctcaagccccgccgcaaa
atgacctcaaaggacactggaaccccagaggcgtggcgagtgatgatgtctctgaagtca
ggtctgctgggtgagagtacctgggccctggacaccgtcaacatcctgctgtatgacgac
agcactgtggcctccttcaccctcgcacagttgcctggcttcctggagctgatagtggag
tacttcagacactgtgtgatggagatctttggcatcctggaggagtatgagatagggacc
atcggccagaagaccctcctggggcctgaagcctgtaaccagggggaggagctgacctct
gaacctgagatggactgtgaggccagccaaccagagcctgagcctgagcaggaggtggag
aggggggaggtagagaagggggaagtagaaaatggggaggacaaacctgctgacatcaca
gagaaaatgacagtggaactgatgtctccccccagtgcaacggaaccagcccctgaggga
atgaaggaggaatctgaagccgaagtgaaggtaaagaaggaagagggggagaaagaacag
gaaggagagaaagaaaaagggaaagaggaaggagaaaatcccacggagagtaagaaagcc
acagctgaaagtaaggaagactatcctaatcagtcagagccaaggccacaacaggccagc
aagtacgacaagtttcccattaaaatcctgcacaaagaggacctgattgaggacatgacg
gagcagctggctcacgtgacagagttcactagcggactgctccactggcaggtaggcggg
ggggattccacggcccacatccagacccactttgagggcaggggagagcagcctgacagg
acggagggagagcgagacgaatgtgccattctgaataaagagcaggagactgactcaagg
acagaggagaaggggaatcgtatcaccgccaccatcgatgacatactgtgtgcccggctc
gaggctctgtcagagggccaccccacccactctgcccccacctacccattcaggctgcac
cagggcgggggccacatgcacatcaccttgctggaggacgagccccgctgtttgaacgag
gctcccctctccacagcttctccttggcaggactccctggccaagcgctgcctctgtgtg
tccaacatcctccgcagcctctccttcatccctgggaacgactcagacatgtcccatcac
ccaggcctggtgctgatcctgggcagactgctgctgctccaccaccagcacccagagagg
aagaggacgtcccctagctaccagagagaggaggtgcaggagcggggcctggcctgcagt
aaggatgagtggtggtgggactgtctcactatactcagggaggacaccttggtcaccctg
gctaacatctctggccagctggacctttccctctacccagagaccatctgcctgcccatc
ctggatggcctactccactggatggtgtgtccctctgccgaggcccaggaccccttcccc
tcggccgccccccactcccccctaaccccccagagactggtgctggagtgcctgtgcaag
ctgagcatccaggacaacaacgtggacctgctgctggccacgccaccgttcagccgccag
gagaagctgtatgccaccctggtgcgctatgtgggtcagcgtaagaaccaggtttaccgc
gagatggctgtggccaccctctccaacctggcacagggggactccacgtcggcacgcgcc
atcgcagtacagaaaagcagcgtgggtaacctgatgggcttcctggaggatggggtgagc
atggcccagtaccagcagaacccccacagcctgctgcacatggtccaccacccccccatg
gagccccccagtgttaacatgatgtgtcgggctgcaaaggctctgctggctatggccaag
gtagaggagaacaggccagagtttgtcttgtacgagggcagactcctggacatctccatc
tcctctgtgctcaacccgggggtagccagcattgtatgtgaagtactctttcagtttgtt
aaaaaattatga
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integrated database retrieval system
