Salvelinus fontinalis (brook trout): 129812826
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Entry
129812826 CDS
T11136
Name
(RefSeq) LOW QUALITY PROTEIN: protein PALS1-like
KO
K06091
MAGUK p55 subfamily member 5
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129812826
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
129812826
Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
PDZ domain-containing proteins
MAGUK family proteins
129812826
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
MMR_HSR1
CSN4_RPN5_eIF3a
SH3_9
Motif
Other DBs
NCBI-GeneID:
129812826
NCBI-ProteinID:
XP_055720699
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Position
16:complement(22740448..22791384)
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AA seq
708 aa
AA seq
DB search
MQKSPLIVLPPANHLQTHTXGGGAGEGARVIMITTSYMNGHMTESDGRGGVEANQEEPQQ
WHREMAVDCPEDLGARTLPVRRSAQLERIRQHQEDLRRRKEEEGRNRQELDLTASIRLKK
LSQNPKVGIDNPTFDPIEGPGGPLGLPPNLGAPTLLELEELLMSLKQVQHCLSDGQSQED
VELVLQLVQKTDFQKAFNIHNAVAQHMNRPSPPFPHTDRAQGLAHEVQSMVHNSQHKEGL
ELNTLLSSPHIQAVLLAHDCVAEQEMQMEPLTPDPCEALTQWGGETVKIVRMEKARDIPL
GATVRNDMDSVVISRIVKGGAAERSGLLHEGDEVLEINGVEIRGKDVNEVFDILADMHGT
LTFVLIPSSQNKPPPIKETVVHVKAHFDYDPSDDPYVPCRELGLCFQKGDILHIISQDDP
NWWQAYRDGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKK
LLYNVKQNDDNDSEEILTYEEMALYHQPANRKRPIALIGPPNCGQNDLRQRLLSSQPDRF
GGAVPHTTRNRRDVEVSGRDYHFVSRQAFDMDATAGKFIESGEFEKNLYGTSTDSVRQLI
NTGKICLLCLHTQSLKTLRSSDLKPYIIFIAPPSQERLRALLTKESKNPKPEELRDIIEK
AREMEQNFGHLFDAAIVNTDQDKAYQELLRLINKLDTEPQWVPSSWLR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatcacccctcatagtgcttcccccggccaaccacttgcaaacacacacgnta
ggaggaggagcaggagaaggcgcaagggtgataatgataaccacgtcctatatgaacggt
cacatgactgagtcagacggaagaggaggagttgaggccaaccaggaggagccccagcag
tggcacagggagatggcggtggactgcccggaggacctgggtgcccgtaccctgcctgtg
aggcgctctgcccagctggagaggatccgtcagcaccaggaagacctgcggaggaggaag
gaggaagagggcaggaacagacaggagctggatctgactgcctccatacggctcaaaaag
ctgtctcagaaccccaaggtgggcatcgataaccccaccttcgaccccatcgagggccct
ggagggccactgggactgccacccaacctgggggcccccactctactggagttggaggag
ctgctgatgtccctgaagcaggtgcagcactgcctgtctgacggccagagtcaggaggac
gtggagctggtgctgcagctggtccagaagactgacttccagaaggccttcaacatccac
aacgctgtggcccagcacatgaacaggcccagcccgcccttcccacacacagaccgtgct
cagggcctggcacacgaggtccagtctatggttcataacagccaacacaaggagggtttg
gagctcaacaccctgctctcctcaccacatatccaggcggtgcttctggcccatgactgt
gttgcggagcaggagatgcagatggagcccctgacccctgacccctgtgaggctctcacc
cagtggggaggggagactgtcaagatagtccgcatggagaaggccagggacatcccactg
ggtgcgacagtgcgtaacgacatggattccgtggtaataagccgcatcgtgaagggcggg
gcggcggagcgcagtgggctgctgcatgaaggagacgaggttctggagatcaacggagtg
gagatcagagggaaggacgtcaacgaggtcttcgacatcctggccgacatgcacggcacc
ctgaccttcgtccttatccccagctcacagaacaaacccccacccatcaaagagactgtg
gtccatgtgaaggctcactttgactacgacccgtctgatgacccgtacgtgccgtgcagg
gaactgggcctgtgcttccagaagggagatatcctccacatcatcagccaggacgacccc
aactggtggcaggcctacagggacggagacgaggacaaccagcccctggccgggctagta
ccaggcaagagcttccagcagcagagagaggccatgaagcagaccatagaagaggataaa
gagcctgagaagtctggaaagctgtggtgtgctaagaagaacaagaagaagaggaagaag
ctcctttacaacgtcaagcagaatgatgacaacgacagtgaggagatcctgacctatgaa
gagatggcgctctaccaccagccagccaatcgaaagcgacccatcgccctgattggtcct
cccaactgtgggcagaacgacttgagacagagactgctgtccagccagccagacagattt
gggggagctgtcccacacacgacacggaacaggcgtgatgtggaggtgagtgggagagac
taccactttgtctcccgccaggcctttgacatggacgccactgcggggaagttcattgag
tcgggagagtttgagaagaacctgtacggaaccagcaccgactctgtccgccaactcatc
aacacgggcaagatctgcctgctctgtctgcacacacagtcgttgaagactctgcgtagc
tcggatctgaagccttacattatcttcatcgctcctccctcccaagaacggttgcgagcc
ctcctgaccaaagagagcaagaacccaaagccagaggagctgcgtgacatcatcgagaag
gcccgtgagatggagcagaactttggccacctgtttgatgcagccatcgtgaacacagac
caggacaaggcctatcaggagctgctgaggctgatcaacaaactggacacagagccacaa
tgggtcccctcctcctggctacgctaa
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